Beta vulgaris (sugar beet): 104886672
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Entry
104886672 CDS
T03548
Name
(RefSeq) WD-40 repeat-containing protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03082
ATP-dependent chromatin remodeling
bvg03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104886672
03083 Polycomb repressive complex
104886672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bvg03036
]
104886672
Chromosome and associated proteins [BR:
bvg03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
104886672
Histone modification proteins
HAT complexes
HATB complex
104886672
HDAC complexes
Sin3A-HDAC complex
104886672
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
104886672
PRC2.2
104886672
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
104886672
Heterochromatin formation proteins
Other heterochromatin formation proteins
104886672
Chromatin remodeling factors
NuRD complex
104886672
NuRF complex
104886672
NuRF complex (fruit fly)
104886672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_RFWD3
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_RIG_1st
eIF2A
MIOS_WD40
NBCH_WD40
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
104886672
NCBI-ProteinID:
XP_010669444
LinkDB
All DBs
Position
2:complement(14937447..14944549)
Genome browser
AA seq
426 aa
AA seq
DB search
MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDRDEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDAENDARHYDDERSDFGGFGCASGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVSAEVYIFDYSKHPSKPPLDGACNPDLRLRGHNTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATPRNKSLDAMQTFKVHEGVVEDVAWHLRHE
YLFGSVGDDQYLLIWDLRSPMAFKPVQNVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKINTALHTFDCHKEEVFQVGWSPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLSTDDP
AANKAP
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggatgaggaggagatgagaggggagatcgaagagaggttgataaacgaggaa
tacaagatatggaagaagaacactccgttcttgtatgatttggtgattacccatgctctt
gagtggccatctcttactgttgagtggctccccgaccgagatgagcctccagggaaggat
tactctgtgcagaagatgattttggggacccacacttccgagaatgagccgaattacctt
atgttggctcaggtccagcttcctcttgaagatgctgagaacgatgcgcggcattatgat
gatgaacgatctgattttggtggatttgggtgcgccagtgggaaggtacaaattatacag
cagataaaccatgatggagaggtcaatcgggcgcgttacatgcctcaaaatccattcata
attgccaccaaaaccgtgagcgcagaagtatatatttttgactacagtaaacacccatca
aagccaccacttgatggtgcatgcaatcctgatttgaggttacggggccacaacactgaa
ggatatggtttatcatggagcaaattcaagcaggggcatctattgagtggttctgatgat
gctcagatttgcctctgggacataaatgcaactccgagaaataaatctttggatgccatg
caaacatttaaggttcatgaaggcgttgttgaagatgttgcatggcatttgaggcatgaa
tacttgtttggttctgttggagatgatcagtatctgcttatatgggaccttcgatctcca
atggcttttaagcctgtacagaacgtagttgctcatcaaagtgaggtaaattgcttggct
ttcaatccctttaatgaatgggttgtggcaacgggttctaccgataagactgtcaagttg
tttgatctaaggaaaattaacaccgcactacatacttttgattgccacaaggaggaggta
ttccaagttggctggagcccgaaaaatgagactatcttggcttcttgctgtcttggtaga
agattaatggtgtgggatcttagcagaattgatgaagaacagactccagaggatgccgaa
gatggtccgcctgagttgctattcattcacggaggtcataccagcaaaatttccgacttc
tcatggaatccatgtgaagattgggttgttgccagtgtagccgaggacaacattcttcaa
atctggcagatggctgagaacatataccatgatgaggatgatttatcaacagacgaccca
gcagccaacaaggccccttag
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