Beta vulgaris (sugar beet): 104887097
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Entry
104887097 CDS
T03548
Name
(RefSeq) RAB6A-GEF complex partner protein 1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bvg04131
]
104887097
Membrane trafficking [BR:
bvg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
104887097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RSE1_2nd
Beta-prop_RIG_2nd
Nbas_N
Beta-prop_HPS5
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
104887097
NCBI-ProteinID:
XP_010669989
LinkDB
All DBs
Position
1:complement(4577449..4594949)
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AA seq
1125 aa
AA seq
DB search
MYMPYGWPYVMPIESGLCPSSQRIIYLKVINHLLLVVAPSHLELWSSSQHKVRLGKYKRD
SRSIQTEGENVQAVWSPDAKLVAVLTSSFHLHIFKVQFSDKAINMGGKQPSALFLANINL
VLNEQVPFSVKDLTVSNIVCDSKHLLIGLSNGSLYTISWKGEFCGASGIDFHIGESNENL
TAPYSYENGTATGRSVEEHQLGPTLYEFSSIVRLELSLLLRILFVIFSDGKLVLCSVSKR
GLRQAESIKPEKILGSGDAVCVSVASDQQILAVGTRRGVVELYDLADSASLMRTVSLYDW
GYSTEDTGPVSCIAWTPDNSAFAVGWKLRGLTVWSVSGCRLMSTIRQVGLGSVSSPVAKP
NPDWKYEPLMAGAATLHWDEYGYRLYAVEENSSERILAFSFGKCCLNRGVSGSTHVRQVI
YGEDRVLLVQSEETDELKMLHLNLPVSYISQNWPVLHVAASIDGTFLAVAGLHGLILYDI
RLKKWRFFGDITQEQKINCKGLLWLGKIVVVCNYVDSSNTYELLFYPRYHLDQSSLLCKK
SLLTKPIVMDVYQDYILVAYRPFDVHIYHVKLSGELTPTSNPDLQLSTVRELSIMTAKSP
PASMRFIPDRFYKDYASVNQKSPQEPVRCLILRANGDLSLLDMDDGHELELTDSVELFWV
TCGQADDKENLIEEISWLDYGHRGMQVWYPSPGADPFKQEDFLQLDPDLEFDREIYPLGL
LPNAGVVVGVCQRMSFSACTEFPCFEPSPQAQTILHCLLRHLLQRDKIEEALKLAQLSAE
KLHFSHCLEWLLFTVFEAEIARLSMNKNQKAVTIHKPSKTLLEKTCDLIRNFPEYHNVVV
SVARKTDGRHWADLFPAAGRSTELFEECFQRRWYQTAACYILVIAKLEGPAVSQYCALRL
LQATLDDSLYELAGELVRFLMRSGREYEQAPTESDGISPRFLGYFLFSSKKQPFDSKSST
HKEQSAHIASVRSILESHASYLMSGKELSKLVAFVKGTQFDVVDFLQRERYGCAHLENFA
SGLELIGQKLQMGTLQSRLDAEFLLAHMCSVKFKEWIVVLATLLRRSEVLFDLFRHDARL
WKAYCITLQSQPAFAEYHDLLEDLEERLSSVTKFQEIWPRQQSIL
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtatatgccgtatggatggccgtatgttatgccaattgaatcaggactttgtccttct
tctcaacgaattatatatcttaaagttattaatcatttattgctcgttgttgctccttct
catttggagctatggagttcttctcagcataaggtaaggctggggaagtacaaaagggat
tcgaggtcaatccagacagaaggtgagaatgtacaggctgtgtggagtccagatgcaaaa
ttggttgctgttcttacttcttctttccaccttcacatatttaaggtgcaattttctgac
aaagctataaacatggggggaaagcagccatcagcgttgtttcttgcaaacattaatctt
gttctgaatgagcaggtccctttttctgtcaaggacttaacagtgagtaatattgtatgt
gatagtaagcatttgctgatcggactctctaatggatctttatatactatatcatggaaa
ggggagttctgtggtgcttctggtattgacttccacattggtgagagtaatgagaacctc
acggcaccttattcctatgaaaatggtactgcaacaggaagaagtgttgaggaacatcaa
ctaggcccaacactatatgagttttcttctattgtgaggctggagctttcactattattg
aggatactatttgttatcttctctgatgggaagcttgtactctgctctgtaagcaagagg
ggactcaggcaagccgagtctattaaacctgaaaaaatacttggttcgggtgatgctgta
tgtgtttcagtagcttcggatcagcaaattcttgctgttggtactagaagaggggttgtt
gagttgtatgacctggctgattctgcttcactaatgcgtactgtttccttgtatgattgg
gggtattctaccgaggatactggtcctgttagttgtattgcatggacgcctgataattca
gcctttgctgttggatggaagcttagaggacttacggtttggtctgtctcaggatgtcgt
ttaatgtctactatacgtcaagttggtttggggtctgtctcttctccagtagctaagcca
aacccagattggaaatatgaaccgttaatggctggtgctgcaacactacactgggatgag
tatggatacaggttgtatgcggtggaggagaattcatcagagagaattcttgcgttctcc
tttggtaaatgttgcttaaacagaggagtttcaggctcaacacatgttcgtcaagtgatc
tatggtgaagatcgcgttcttcttgtgcagtctgaggagacagacgagcttaaaatgttg
catcttaatcttccagtctcttacatttcacagaattggccagtattacatgtggctgct
agcatcgatggaacattcttggcagttgctggtcttcatgggttgatattgtatgacata
cgtcttaaaaaatggcggttctttggagatattacacaagaacagaagatcaactgcaag
ggtttgttgtggctggggaaaattgttgttgtctgcaattatgtcgattcctccaacacg
tatgagttgctattttatcctagataccaccttgatcaaagctcactattgtgtaaaaaa
tcgttgctgacaaagccgatagtgatggatgtctatcaagattatatacttgttgcctat
cgcccatttgatgtacacatctaccatgtgaaattatctggtgaactgacccctacaagt
aatccagatttacagctttctacagtacgagagctctccatcatgaccgcaaagagccct
ccagcatctatgcgcttcataccagatcgattttataaggactatgcttcagtgaatcaa
aagtcaccccaagagcctgtcagatgtttgatattgcgtgcaaacggggatctgtccctt
ctagatatggatgatgggcatgagctggagctaacagattctgttgaactgttttgggtt
acatgtggccaagcagatgacaaagaaaatctcattgaagaaatttcttggttggattat
ggtcatcggggaatgcaggtctggtatccatcgccaggtgctgacccttttaagcaggaa
gacttcttgcagctggatcctgatctggaatttgatcgtgaaatttatccattgggactt
cttccaaatgctggagtagtggttggtgtttgccagagaatgtcattttctgcttgtaca
gagtttccatgttttgagccatctccccaagcacaaacaatattgcattgcttgcttcgt
catctccttcagagggacaagattgaggaagctttgaagctggcacaattatcagcagaa
aagctccatttctcccattgtcttgagtggctcctctttacagtatttgaagctgaaatt
gcaaggttaagcatgaataaaaatcagaaggctgtcaccattcacaagcctagtaaaaca
ctcctggagaaaacatgcgacttgatcagaaatttccctgaatatcacaatgttgtcgtg
agcgttgctaggaaaacggatggtcgacattgggcagatttgtttcctgcagctggtaga
tcaacagagttgtttgaggagtgctttcagagaagatggtaccaaactgcagcttgctac
atcctagttattgccaaacttgaaggtcctgcagtcagccagtactgtgctttgcgcttg
ttacaggcaactcttgatgattctttgtatgaacttgctggggaactagtgaggtttctg
atgagatctggaagagagtatgagcaggcaccgacagaatcagatggaatttcacctaga
tttttgggttattttttgttctcttcaaagaagcagccttttgattccaagagcagcact
cataaagagcagagtgcgcatattgcttctgttagaagcattttggaaagccatgctagc
tatttaatgtcagggaaggagctgtcgaaacttgttgcgtttgtgaagggcactcaattt
gatgtagtggacttcctccaacgagaaagatatggatgtgctcatttagaaaattttgct
tcaggtcttgaacttattgggcaaaagcttcaaatgggtacacttcagagtcggttggac
gcagaatttctcttggctcacatgtgctctgtcaaatttaaagaatggattgttgtcttg
gccactctcttgagaagatccgaggtactctttgatctatttcggcatgatgcgcgtcta
tggaaagcatattgcattactctccagtcacaaccagcatttgctgagtatcatgatttg
ctcgaagacctcgaagaaagactttcatctgttacaaaatttcaagagatatggccaaga
caacaatccattctttaa
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