Beta vulgaris (sugar beet): 104887121
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Entry
104887121 CDS
T03548
Name
(RefSeq) protein strawberry notch homolog 1
KO
K26273
protein strawberry notch
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bvg03036
]
104887121
Chromosome and associated proteins [BR:
bvg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104887121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
Zn_ribbon_FGT1_1
SBNO
Zn_ribbon_FGT1_2
PHD
ResIII
PHDvar_NSD
PHD_4
Motif
Other DBs
NCBI-GeneID:
104887121
NCBI-ProteinID:
XP_010670017
LinkDB
All DBs
Position
2:26832195..26878404
Genome browser
AA seq
1274 aa
AA seq
DB search
MSQLPINPPPDSTLPSSSNGVILGGVAPCQVRCAGCRLILTVAAGVAEFVCPTCRLPQML
PPELLKNFRPRPPPILPPLPPPNPNPNPNPNSVGPTPPPVQAQGIDPSKMQLPCANCKAI
LNVPHGLSRFKCPQCDIDLAVDVSKIKQFLPLPPPPVEEVNEVAIDVEQEEGEGGMAGET
FTDYRPPKLSIGPPHPDPIVETSSLSAVQPPEPTYDLAIKEEIVQSKMLSCLQLETLVYA
SQRHMQHLPNGERAGFFVGDGAGVGKGRTIAGLIWENWQHRRRKALWISVGSDLKFDARR
DLDDVGATSVEVHALNKLPYGKLDSKSVGIREGVLFSTYSSLIASSEKGKSRLSQLVQWC
GGRDFDGLVIFDECHKAKNLVPEAGGQPTRTGEAVLELQDKLPEARVVYCSATGASEPRN
MGYMVRLGLWGDGTSFLNFKDFLGALEKGGVGALELVAMDMKARGMFVCRTLSYKGAEFE
VVEAPLDPKMTETYKKAAGFWAELRVELLTASAFHNEEKPTSSQLWRLYWASHQRFFRHL
CMSAKVPTVVKLAKQALGESKCVVVGLQSTGEARTEEAVTKYGLELDDFVSGPRELLLKF
VEENYPLPEKPEPIPDDEGEKELPRKRRSANPDISFKGRVRKVAKWKAESDEESFDESES
DIGNESTESDDEFQICDICNGEEDRKKLLKCACCGQLLHPSCLEPPVADVADVSEGWTCN
SCQQKTEEYLQARRVYIEELTKRYEGAVERKTKIMEIIRSLDLPNNPLDDIIDQLGGPDN
VAEITGRRGMLVRASCGKGVTYQARNTKDVSMEMVNMHEKQLFMDGKKFVAIISEAGSAG
VSLQADRRAINQRRRVHLTLELPWSADRAIQQFGRTHRSNQASAPEYRLLFTDLGGERRF
ASIVAKRLESLGALTQGDRRAGLSLSSYNYDSAYGKKALMVLYRGILEQDSLPVVPPGCS
TENPESIQDFISKAKAALVSVGIVRDSGSAKESGKVSARIIDSDMNDVGRFLNRLLGLPP
EIQNRLFELFINILDVIIQNARTEGNLDSGIVDIKANIIELQGKPKTVHVDQMSGAPTVL
FTFTLDRGVTWEFASSLLNEKQKGSLGSAHDGFYESKREWLGRRHFLLAFEGSTSGFFKI
VRPAVGEAIREMPLSELRNKYRKISSLDKARSGWEDEYEVSSRQCMHGPNCKVGSYCTVG
RRLQEVNVLGGLVLPIWNAIEKALSKQARQSHRRIRVVRIETTTDSQRIVGLLIPNAAVE
VVLEDLAWVQEIDD
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaactcccaattaatccaccaccagactctactcttccttcgtcgtcaaatggc
gtaattctcggcggtgtcgccccttgccaggtgcgctgtgccgggtgtcgcctcatttta
accgttgcggctggcgttgcggagtttgtttgcccgacttgccggcttccgcagatgctc
cctcctgagctgttgaagaattttaggcctagaccacctccgattctcccacctctacca
ccgccaaaccctaaccctaaccctaaccctaattcggtggggcctactccgccacctgtt
caggctcaaggtattgatccgtctaagatgcagctcccttgtgctaactgtaaggctata
cttaatgtccctcatggcctgtctcgcttcaaatgtcctcagtgcgatatcgacctcgcc
gtcgatgtatcgaaaattaagcagtttctccctcttccgcctcctcctgtcgaagaagtc
aatgaggtagctattgatgtcgaacaagaggaaggtgaaggtggaatggcgggggagacg
tttacagactatcgacctcctaaattgtcgataggccctcctcaccctgatccaattgtg
gagacatcatccttatctgcggttcaaccacctgaacctacttatgatttggcaattaaa
gaggaaattgtgcagtcgaagatgctgtcttgcttgcagcttgaaacattggtctatgct
tctcagagacacatgcagcatcttccaaatggtgaaagggcaggattctttgttggtgat
ggtgctggtgtgggcaaaggtcgtactattgcaggtttaatatgggagaactggcaacat
agaagaagaaaagcattgtggatatctgttggttcagacttaaagtttgatgcacgaaga
gacttggatgatgtaggtgcaacaagtgttgaagtccatgctctgaataagttgccttat
ggaaagcttgattcaaagtctgtgggaattagagagggtgttctgttttcgacatatagc
agtcttattgcgtcttccgaaaaggggaagtctcgcttgagccaacttgttcagtggtgt
ggtggaagagattttgacggtcttgtcatatttgacgagtgtcacaaggctaaaaatctg
gttcctgaagctggggggcagcctacacgtacgggtgaagcagttttagaacttcaggac
aaacttcctgaagcacgagtagtctattgctcagctactggtgcatctgagccacgcaat
atgggttacatggttcgtcttggtctttggggtgatggtacatcttttttgaatttcaag
gattttctgggtgctctagagaaaggtggagttggagctctggaacttgttgccatggac
atgaaagcaagaggcatgtttgtttgtcgaacacttagctacaagggggctgagtttgaa
gttgttgaggcaccgttggatcccaagatgacggaaacatataagaaggcagcagggttt
tgggctgaactgcgtgtagagttactgacagcaagtgcatttcataatgaagagaaacct
acttctagccagctgtggcgattgtattgggccagccatcagcgattctttagacacctg
tgcatgtcagctaaagtcccaacagttgtaaaacttgctaagcaagcattgggagagagt
aaatgtgtggttgttggccttcagagtacgggagaggcacgaacagaggaagctgttaca
aaatatggccttgaacttgatgactttgtttctgggcctcgtgagctgctactgaaattt
gttgaagaaaattatcctctacctgaaaagcctgaacctattccagatgatgaaggtgag
aaggaacttccgcggaagcgacgctcagcaaatcctgatatttcattcaaagggcgagtg
agaaaagttgctaaatggaaggctgaaagtgatgaagaaagctttgatgaatcggaatct
gatattggcaatgaatctactgaatctgatgatgagtttcagatctgtgacatttgtaat
ggagaagaggatagaaagaaattgctcaaatgtgcctgttgtggccaattactccaccct
tcttgtctagaaccacctgtagcagatgtagcagatgtatctgagggatggacatgtaat
tcatgccagcaaaagacagaagagtatctacaagcaaggcgtgtctacatagaagaactc
acaaagaggtatgaaggagctgtggaacggaaaacgaagattatggagattattcggtcc
ttggatcttccgaacaatccactagatgacattattgatcagctgggtggacctgataat
gttgcagaaataacaggaaggcggggcatgcttgttcgggcctcgtgtggtaaaggtgtc
acctatcaggcacggaatacgaaagacgtgtccatggagatggtgaatatgcatgagaag
cagcttttcatggatggtaaaaagtttgtggctatcatatctgaagctgggtcagctggt
gtttctctgcaagcagataggagggctataaatcagaggaggagggttcacttaacgtta
gaactcccatggagtgctgacagagcaattcagcagtttggcaggacccatcgatcaaat
caagcctctgctcctgaatacagactcctctttactgatcttggtggtgaaagacgattt
gcatctatcgtggcaaagaggctagaatctcttggggcattaacacaaggggaccgcagg
gcaggtctttcattgagctcctataactatgacagtgcctatgggaaaaaggcgctgatg
gtgttgtatagaggaatcctggagcaggattccttgccagttgtcccccctggatgttcg
actgaaaatccagaatcaatccaagacttcatatccaaggcaaaagctgctctggtgtct
gttggcattgttagggactcaggtagtgcaaaagaatctggaaaggtttctgctcgtata
attgactcagacatgaatgatgttggtcgttttctcaatcggttgttaggcttgcctcct
gagatccagaacaggctttttgagttatttatcaacatccttgatgtaattattcaaaat
gcgcgaactgaagggaatctggactctggaattgttgacataaaagctaatattattgaa
ctacaagggaaaccaaagactgtgcatgtggatcaaatgtccggtgcaccaacagtattg
tttacattcactcttgatcgtggggtcacttgggagtttgcttctagtttgctcaatgag
aagcaaaagggaagtcttggctcagcgcatgatggattctacgagtctaagagggaatgg
cttggaagacgtcacttccttttggcttttgaaggctctacctctggcttttttaagata
gttcgtcctgctgttggggaggcaataagggaaatgcctttaagtgaacttagaaacaag
tataggaaaatctcttctctggataaggctcgtagtggatgggaagacgagtatgaagtt
tcatctagacagtgtatgcatggccccaattgcaaggttggtagctattgtactgtgggg
agaagactgcaagaagttaatgttttaggtggcctggtcctcccaatctggaatgcgatt
gaaaaagccctatcaaaacaggcccgtcagagtcatagacggattcgtgttgtgcgtata
gagacaacaacagatagccaacgaattgtggggctcctgattccaaatgcagctgttgaa
gttgtacttgaagatttggcatgggttcaagaaattgatgactaa
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