KEGG   Beta vulgaris (sugar beet): 104887304
Entry
104887304         CDS       T03548                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
bvg  Beta vulgaris (sugar beet)
Pathway
bvg03030  DNA replication
bvg03410  Base excision repair
bvg03420  Nucleotide excision repair
bvg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bvg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104887304
   03410 Base excision repair
    104887304
   03420 Nucleotide excision repair
    104887304
   03430 Mismatch repair
    104887304
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bvg03032]
    104887304
   03036 Chromosome and associated proteins [BR:bvg03036]
    104887304
   03400 DNA repair and recombination proteins [BR:bvg03400]
    104887304
DNA replication proteins [BR:bvg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104887304
  DNA Replication Termination Factors
   ELG1-RFC complex
    104887304
Chromosome and associated proteins [BR:bvg03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    104887304
DNA repair and recombination proteins [BR:bvg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104887304
  Check point factors
   HRAD17(Rad24)-RFC complex
    104887304
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 RCF1-5-like_lid Rad17 RuvB_N AAA_5 AAA_16 AAA_assoc_2 Mg_chelatase AAA_11 PhoH AAA_24 AAA_2 SLFN-g3_helicase nSTAND3 AAA_14 ResIII AAA_19 AAA_30 AAA_28 AAA_7 NPHP3_N RNA_helicase AAA_25 Parvo_NS1 IstB_IS21 DUF815 bpMoxR DNAX_ATPase_lid TIP49 AAA_18 DUF3853 NB-ARC
Other DBs
NCBI-GeneID: 104887304
NCBI-ProteinID: XP_010670219
LinkDB
Position
2:33033609..33048148
AA seq 340 aa
MAPVLQSSQQWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKSFAAVAVGPAQRQGGYPCPPYKIII
LDEADSMTEDAQNALRRTMETSSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPQEIMK
SRILHICREESLNLDSEALSTLSTISQGDLRRAITYLQGAARLYGSSISSKDLISVSGVI
PEEVVEEFLAACKSGNFDLADKEVNNVISEGYPVSQMISQLFDIIVEANDLSDEQKSRIF
KKLGEADKCLVDGADEYLQLLDVAGNTMRALCNMAQEFSY
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggcgccagtgttgcagagctctcaacaatgggtggaaaaatatcgaccgaaacaagtg
aaagacgtcgcgcaccaagatgaagtcgttcgagtactcaccaacaccctcgaaactacc
aattgtcctcatatgctattttatggtccacctggaaccggaaaaactaccacggctctt
gccattgctcatcagctttttgggcccgagctatacaagtctagggttctagagttgaat
gcaagtgatgaccgtggcatcaatgttgtgcgtacaaaaataaaaagttttgctgctgtt
gctgtaggtcctgctcaaagacaggggggctatccttgtccaccttacaagattattatt
ctagatgaggcagattcaatgactgaagatgctcagaatgcgctgcgtcggacaatggag
acttcctctaaagttacaagattctttttcatctgcaactatattagcaggatcatagag
ccactggcttcaaggtgtgccaaatttagatttaagccacttccgcaagagataatgaaa
agtcgtattctgcatatatgtagagaagaaagcctcaatctggattctgaggcgctttca
accttgagtaccatttcacaaggtgatcttcgtcgggccattacatacttgcagggagct
gctcgcttgtatggatcatccatatcatccaaggacttaattagtgtttctggggtcata
ccagaggaggttgttgaggagttcttggctgcttgtaagagtggcaactttgatttggct
gacaaagaagtgaataatgttatttctgaaggctatccagtttcgcagatgatctctcag
ttatttgatattatcgtggaagctaatgatttgtcagatgagcagaagtcaagaatcttc
aaaaagttaggtgaagcggataagtgtcttgttgatggggcagacgagtatttgcagttg
ctagatgttgctggtaacaccatgcgtgctctttgtaacatggcacaagagttctcttat
tag

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