Beta vulgaris (sugar beet): 104887401
Help
Entry
104887401 CDS
T03548
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg00040
Pentose and glucuronate interconversions
bvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104887401
Enzymes [BR:
bvg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104887401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104887401
NCBI-ProteinID:
XP_010670318
LinkDB
All DBs
Position
2:complement(33737470..33740598)
Genome browser
AA seq
450 aa
AA seq
DB search
MEFVKFKIQIPIFIFATIFVAIPTIQANTIGHVGNHTTKDTEHDEWFQRKLAEAYNASLL
AYHHDPIEVMNHFNYHVHRALEGTNSTRRGLNKYQGECKAQNPIDRCWRCKADWAVDRKK
LADCVKGFGRQTTGGKKGAYYTVTDPSDNDVVNPKPGTLRFAVLQPQPLWIIFAKDMTIK
LKAELMITSDKTIDGRGAQVQIADGAGITIQFANNVIIHNIKIHDIVPSTGGMIRDTNNH
VGIRGADDGDGINVFASSNIWLDHLSMWNCKDGLIDIVKASTAITLSNNHFTRHDHVLLF
GADDKDPADEIMQISLAFNHFGKGLVQRMPRCRFGFFHVLNNDYTHWIMYAIGGTSHPTI
ISQGNRFIAPPNPTAKMITNRNNVVGDDWKKWIWRSENDQFVNGAYFVESGHPLDETRFK
KDFIKAKPGTYVRRLTRFSGQLRCRVGQSC
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgtaaaattcaaaatccaaatccccattttcatttttgcaacaatttttgta
gctattcctaccatacaagctaacaccattggacatgttggaaatcacactactaaagac
actgaacatgatgaatggtttcaaagaaaactagcggaagcttataatgcttcattactt
gcctaccatcatgacccaattgaagtcatgaaccacttcaactaccatgtccatagggca
ttggaaggtaccaatagtacaagaagaggtctgaataagtaccaaggtgaatgtaaggct
caaaacccaattgatcgttgttggaggtgcaaggccgattgggctgtagatcgaaaaaag
ttagccgattgtgtaaagggttttggacggcaaacaaccggtggtaaaaaaggtgcttat
tatactgttacggacccatctgacaatgatgtggttaaccctaagccaggaaccctacgt
tttgctgtgcttcaaccgcagcctttatggattatatttgctaaagacatgacaattaag
cttaaggctgaacttatgattacaagtgataaaaccattgatgggcgtggtgcccaagta
caaattgctgatggagctggaattaccatacaatttgctaataatgtcattattcataac
attaagatccatgatattgttccatctacgggaggtatgattagagacacaaataaccat
gttggtattagaggagctgatgatggagatggtattaatgtctttgcttcctccaacatt
tggcttgatcatctttctatgtggaattgcaaagatggactcattgacattgttaaggct
tctactgccatcactctttctaacaaccacttcactcgacacgaccatgttttgttgttt
ggggccgatgataaagatcctgcagatgagatcatgcaaatatcattagccttcaatcac
tttggaaaagggcttgttcaaagaatgccaaggtgtagatttggattcttccacgttctc
aacaatgactacacacattggataatgtatgctatcggtggtacttcacaccccaccatc
atcagtcaaggaaaccgatttattgctcctcccaaccctacagctaaaatgataacaaat
cggaataacgtagtgggagatgactggaaaaaatggatatggagatcagagaatgatcaa
ttcgtaaatggagcttactttgttgaatcgggacaccccttggacgagacgcgtttcaag
aaggatttcattaaagcaaaaccaggaacatatgtgagaagacttacccgcttttcaggt
caactcagatgtagggttggtcaaagttgctag
DBGET
integrated database retrieval system
