Beta vulgaris (sugar beet): 104887433
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Entry
104887433 CDS
T03548
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03013
Nucleocytoplasmic transport
bvg03015
mRNA surveillance pathway
bvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104887433
09122 Translation
03013 Nucleocytoplasmic transport
104887433
03015 mRNA surveillance pathway
104887433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvg03019
]
104887433
03041 Spliceosome [BR:
bvg03041
]
104887433
Messenger RNA biogenesis [BR:
bvg03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
104887433
Spliceosome [BR:
bvg03041
]
Common components
Common spliceosomal components
Cap binding complex
104887433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
THB
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
104887433
NCBI-ProteinID:
XP_010670358
LinkDB
All DBs
Position
2:34751003..34758360
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AA seq
858 aa
AA seq
DB search
MSSWKTLILRIGEKCPEYGGNLDFKEHIDSCYAILWRELDQQEDHEILFYVLQCAEQLPH
KSPFYGTLIGLLNLEKEDLGKLVVETTHSNLQQAIQSENCDRIRVLLRFLTVLMCSKVLQ
PASLVVVFETLLSSAATIVDEEKGNPAWQARADFYISCVLSCLPWGGAELMEQLPEDIDR
LLVGIQAYFSIRRHLIDSGFSIFVDIAKDHTSNDKDFLEDLWGRIQDLSNNGWKLESVPR
PYLSFEAQLVAGKSHDFGPIICPEQPRLPSTTSSVAFGRQKHEADLKYPQRNRKLNIFPQ
NKIEDLAPIDQFIMEEYLLDILLFLNGCRKECAAYMVGLPVPFRYEYLMAELVFSQLLLL
PQPRFKSTYYALVIMDLCKALPGAFPAVVAGAVRALFDKIAELDTECRARLILWFSHHLS
NFQFIWPWEEWAYVLELSKWAPQRVFVQEVLEREVRLSYWEKIKQSVENAPGLEELLPPK
GGPNFRYNAENGRNKAEWLALSEELNGLVRGRQTVREIISWVEENVIPVHGLEVTIQVVI
QTLLNIGAKSFTHLMTVLERYGQVIAKVCPDEDRQVMLINEVSTFWRNSTQMTAIAIDRM
MGYRLISNLAIVRWVFSSENVDQFHTSDRPWEILRNAVSKTYNRICDLRKEISSLKQRLQ
SAEEATANAKAELETAESKLTLMNGEPIVGDNPIKLKRLISSSEKAEEEEVALRESLEAK
EALLFRALGENEALFLSLYKNFSIVLLDRLPKGSAIGTSRSLRASLIDTMTVDSDEPSVM
DIDQEKGLNSVSNGEKGSAAYNLSETDQWGLSTLGYVKAITRQYASEIWPHVEKIDEEIL
SGSVHPLFRKAVYCGLGR
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgagtagctggaaaaccctaattctccgaatcggcgaaaaatgtcccgaatacggcgga
aacctagacttcaaagaacacatcgacagttgctacgccattctttggcgcgaattagac
caacaagaagaccacgaaatcctattctacgtcctccaatgcgccgaacaattgcctcac
aaatctcccttttacggcaccttaatcggtctcctaaacctcgagaaagaagatctcggc
aaattagtagtcgaaaccactcattccaatcttcaacaagcaattcagtcggaaaattgc
gacagaattcgtgttttgttgcgatttctcactgttttgatgtgtagcaaggttcttcaa
cctgcttctttggttgttgtgtttgagactttgctttcgtcagctgctaccattgttgat
gaggagaaaggcaatcctgcttggcaagcgcgcgctgatttttatataagttgtgttttg
tcatgccttccgtggggaggtgctgagcttatggagcaacttcctgaggatattgatcga
cttttggttgggattcaagcttatttcagtattcggagacaccttattgattctggcttt
tctatttttgtggatattgccaaagatcacacatcaaatgataaggatttcctggaagat
ttatggggtcgaattcaggatttgtccaacaatggttggaaacttgaaagtgttcccagg
ccctacctctcttttgaagctcagcttgtagctggaaagtctcatgattttgggcccatt
atatgccctgagcagccaagattgccgtctactacttccagtgttgcctttggtagacag
aagcatgaagctgatctgaaatacccacaaagaaatcgcaagctaaatatatttcctcaa
aataagattgaggatttggcccctatagatcagttcattatggaagagtatctgttagac
attttgttgttcctgaatggctgtcggaaagaatgtgctgcttacatggttggccttcca
gtacccttccgctacgagtacctcatggccgagttagtcttctcacaactccttttgctt
cctcagccacgattcaagtcaacatattacgctttagttatcatggatctttgtaaagcg
cttcctggggcattcccagcagttgtagctggcgcagtacgtgctctttttgacaagatt
gctgaattagatacggaatgtcgagctcggctgatcctttggttttctcatcatttatcg
aactttcaattcatttggccctgggaagaatgggcctatgtcttggaactttcaaagtgg
gctccccaacgtgtatttgttcaggaggttctggaaagagaagttcgattgtcttactgg
gagaaaatcaagcagagtgttgaaaatgcacctggcttagaagagttacttcctccaaag
ggtggtccaaacttcagatataatgcagaaaatggccggaacaaagctgagtggcttgct
ttgtctgaagaactgaatggcttggttagaggcagacaaactgtacgagaaataatatca
tgggtagaagaaaatgtgattcctgtgcatgggttggaagtgactatccaagtagtgatt
caaactttattgaatattggagcgaagagcttcactcacctaatgactgttttagaaaga
tacggccaagtcattgctaaggtatgtccagatgaggacaggcaagtcatgctaattaat
gaagttagtactttctggagaaacagcactcagatgactgccatagccatcgaccgtatg
atgggttatcgtctgatctctaatttggctatcgtgagatgggtcttctcttcagaaaat
gtggatcagttccatacatcagatcggccttgggagattctcagaaatgctgtaagtaaa
acatacaaccgcatatgtgatctaagaaaagaaatctcctcactgaagcaacgtcttcag
tcagcagaagaagcaacagctaatgctaaagcagaactagaaacagctgaatcaaaactt
acacttatgaatggtgaacccattgttggtgacaatcctatcaagttgaaacgccttata
tcttcttctgagaaggctgaagaggaagaggtggctttacgggaatccttggaggcaaaa
gaagctctacttttccgtgccctcggtgaaaatgaggccttgtttctctccttgtataag
aatttttccatcgttctgcttgatcgtctccccaagggctctgcaattgggacatctcgt
agccttcgcgctagtctgattgacacaatgacagtagattctgatgagccatcagtaatg
gatatagaccaagagaaaggtctaaatagtgtgtcaaatggggagaaaggatctgctgct
tacaatttaagtgaaactgaccaatggggtttatcgacactgggatatgttaaggcaatc
actagacaatatgcttctgagatttggcctcatgttgagaaaatagatgaagagatcttg
agtggaagtgtgcacccgcttttcaggaaagctgtttattgtggtctaggtcggtaa
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