Beta vulgaris (sugar beet): 104887678
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Entry
104887678 CDS
T03548
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bvg03041
]
104887678
Spliceosome [BR:
bvg03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
104887678
Other components
Complex C specific factors
104887678
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Mis12
Motif
Other DBs
NCBI-GeneID:
104887678
NCBI-ProteinID:
XP_010670678
LinkDB
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Position
2:complement(38747848..38754231)
Genome browser
AA seq
858 aa
AA seq
DB search
MDDYQEMEKFGLDNDFEGGQYIGNEFFFKKRKEKAVQSKDDILYGVFASGSSDSDMDDDP
FSGKKKKKRKGGIITKADYSKPVNFQSSGVSNPNQEVQEHGADGFKPGLGLGAGPSVRAG
LGSGLGSSNSGEKSLGGKMTDDNSREEDDDQSFLPSGFGKKIKEGAEKRREKSKLGFGDS
KSQSGKAKRGSDVLGGNVGGFERHTKGIGMKLLEKMGYKGGGLGKNEQGIVAPIEAKLRP
KNMGMGFNDYQESKNLPSLVDVPPPPELEEKQVSLKREEKLWKKQARSRVKKNENVITPE
ELLAMKAEAQGPELVLQKVVDMRGPQVRVLTNLENLNAEEKARESDIPMPELQHNIRLIV
DLAELNIQKMDRDLRNERETVVALQKEKEMLQIDAARQKKQIHSMEEVLQVLDNVEEEHT
SGRLTLKSLANSFGDLQRRFPEEYKLGNLSCIASSFALPLLIRVFQGWDPLQNPSHGLDV
IALWKGLLQGDEDHDIFEDASAPYSQLVAEVVFPAVRIAGINTWQARDPEPMLRFLELWE
RLLPSSVLQLLLDMIVMPKLSEAVQSWEPCRETIPIHVWVHPWLPLLGQKLETLYQAIRI
KLGTVLYKWHPSDMSAYTILSPWKTVFDAASWEQLIARSILPKLVDVMKEFQVNPVNQKL
DQFYWVMTWASAVPIHHMVSLLELHFFSKWQQVLLHWLRSSPNFEEVTQWYLGWKEVFPA
ELLANERIRQLLDQGLEMMRQAAEGAHVVQPGVKENISYLRVQEQRQYEAQLRATQEADG
ATKNLKELIEAYAQQQGLLFKPKPGRFHNHHQVYGFGSVSIIMDSLHQKIWAQVQEEWPL
VTLDQLVQMQNISGPRRR
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggacgattatcaagaaatggaaaaattcgggctagataatgactttgagggaggtcag
tatattgggaatgaattttttttcaaaaaacgtaaagaaaaggcagttcaatctaaggat
gatatattatatggtgtatttgcatctggtagctcagattctgatatggatgatgacccc
ttttctgggaaaaagaagaagaagagaaaagggggaatcattacaaaagctgattactcg
aaacccgtaaattttcaatcttctggtgtttcaaaccctaatcaggaagttcaggagcat
ggtgctgatgggtttaagcctgggctcgggctaggtgccgggccgagtgtcagagctggt
ttgggtagtggtttgggttcgagtaattcgggggagaaatctttagggggtaagatgact
gatgataattcgagggaggaagatgatgaccaatcattcttgccaagtggttttgggaag
aagatcaaggagggggcagaaaagcggcgtgagaagtcgaaattgggttttggagatagt
aagtctcagtcaggaaaggcgaagagaggttcggatgtgttaggagggaatgtggggggt
tttgagaggcatacgaaagggatagggatgaagttgttagagaagatggggtataaaggt
ggtgggttggggaagaatgagcaaggtatcgttgctcctatcgaagcgaaattgaggccg
aagaatatgggaatggggtttaatgattatcaggagagcaagaacttgccaagcttggtt
gatgtgcctccacctcctgaattagaggagaagcaagtgtctttgaagagggaggaaaaa
ctttggaagaaacaagctcgaagtcgagttaagaagaatgagaatgttattactccggag
gagttgttggctatgaaggcggaggcacaaggtccagaattggtacttcagaaggtggta
gatatgagggggcctcaggttcgggtgctaacgaatttggaaaatctgaatgcggaggag
aaggctagggaaagtgatattccaatgccagagctgcagcacaatatcagattgatagta
gacttggcagagcttaacatccagaagatggacagggatttgaggaatgagcgagagact
gttgttgcgttgcagaaggagaaggaaatgctccaaatagacgctgcacgtcaaaagaag
cagattcactctatggaagaggtattgcaggttttggacaatgttgaggaggagcatacc
tcggggaggttgactttgaaatcccttgcaaactcttttggggacctccagaggaggttt
cctgaggaatataaactcggtaacttatcttgcatcgcgtcttcatttgctcttcctctg
ctgattagggtattccaaggatgggatccacttcagaacccatctcatggactggatgtc
atagctctgtggaaaggtttgttgcagggagatgaggatcatgacatttttgaggatgca
tcagccccgtattcgcaattggtggctgaagtagtatttcctgctgtcagaatagctggt
ataaacacatggcaggccagagatcctgagcctatgcttcgctttctcgaattatgggag
aggctgcttccatcttctgtgctacagttactgcttgatatgattgtgatgcctaagttg
tccgaagctgtgcaatcttgggaaccttgtagggaaacaataccaattcatgtctgggtg
catccctggcttcccttgcttggacagaagttggagactctctatcaagctatccgtatt
aaattaggaactgttctctataaatggcatcctagtgatatgtctgcctatactatatta
tcaccttggaagacagtatttgatgctgcaagttgggaacaacttattgcccgatccatc
ctccccaagttggtagatgtgatgaaggaatttcaagtcaatcctgttaatcagaaactt
gatcagttttactgggtcatgacttgggcttctgcagttcccatacatcatatggttagc
ctactggaattacacttcttcagcaaatggcagcaagttttgctccactggcttcgtagt
agtccaaactttgaagaggttacgcaatggtaccttggatggaaagaggtttttcctgct
gaacttttggccaacgaacgtattcggcagctccttgatcaaggcctggaaatgatgaga
caggctgccgaaggtgcgcatgtggttcagcctggggtgaaagaaaacattagctatttg
agggtgcaggagcaaaggcaatatgaggctcaattgagagccactcaggaagcagatggg
gcaactaagaatttgaaagaacttattgaggcttatgcacagcagcaaggcttgctcttt
aagcctaaacctgggagattccacaaccatcaccaagtatatggctttggcagcgtaagc
attattatggattccttgcatcaaaagatctgggctcaagtccaggaggaatggcctttg
gttactcttgaccaactggtacagatgcaaaacatttctggtccgagacggcgctga
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