Beta vulgaris (sugar beet): 104887847
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Entry
104887847 CDS
T03548
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104887847
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bvg01002
]
104887847
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bvg04131
]
104887847
04121 Ubiquitin system [BR:
bvg04121
]
104887847
Enzymes [BR:
bvg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104887847
Peptidases and inhibitors [BR:
bvg01002
]
Metallo peptidases
Family M67
104887847
Membrane trafficking [BR:
bvg04131
]
Endosome - Lysosome transport
Others
Others
104887847
Ubiquitin system [BR:
bvg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
104887847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
104887847
NCBI-ProteinID:
XP_010670900
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All DBs
Position
3:59931..71943
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AA seq
503 aa
AA seq
DB search
MIRLPSTPAKRIDVNTLARKIDVDNRISLGYYYRIAETLLKQADVYRKEKNIVDLYVMLI
RFSSLVSETIPFHRDYQALHPRERMHYRKKLLAVMDELESLKPEFQRQVDEFNKDCIGMQ
QNQFNGRETTSYNSEASLGWPSAYAPRLESKQVKPASETLPYSWKQNNDFQAASTSMPFE
KKFSKLSLAVPLPNQETLSRHSFLGPNGLRRQWQGPTTEIKVSYPSRADLTPAKDSCLTQ
SIQNAARVQKDEGIGQDMQAVLSLDDGGWSRCEEDMPVGIIRQPLPPPVLAQVQPALHPI
PPSRVADPRPGPAKPSEDGTQSPNSFQDLHIPVKMMEDFLRLAQQNTKKNLETCGVLAGS
LKNRVFHITSLIIPKQESTSDSCQTLNEEEIFEVQDRESLFPLGWIHTHPTQTCFMSSVD
LHTHYSYQIMLPESIAIVMAPTDSSSPHGIFHLSDPGGVSVIRNCQQRGFHPHEEPSDGS
PLYEHCSHVYMNPKLRFDVVDLR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtctaccgtcgacgccggcgaagaggatcgatgtgaacacattagcgaggaag
atcgatgtcgataatcgaatttcgttagggtattattatcgaatcgctgaaactcttctc
aaacaggctgatgtgtatcgaaaagagaagaacatagtggacttgtatgttatgcttatt
aggttttcaagcttggtctctgaaacaatacccttccatcgggattaccaggctttacac
cctagagaaagaatgcattacagaaaaaaattgctggcagtgatggatgagctggaatct
ttgaagcctgagtttcagcgtcaggtggatgaattcaacaaggattgtataggaatgcaa
caaaatcaatttaatggcagagagacgacctcatataactcagaagcatctttgggatgg
ccctccgcttatgctccgagattggagagcaagcaggtaaaacctgctagcgaaacgctt
ccgtattcatggaaacagaataatgattttcaagctgcttcaacttcaatgccttttgag
aaaaaattctctaagctgtctttagcggtgccacttccaaaccaggaaacattgtcgaga
cactcatttttaggtccaaatggacttcgtcgtcagtggcaaggaccgactacggaaatc
aaggtgtcttacccaagccgtgctgacttaactccagctaaagattcatgcctcactcaa
agtatacaaaatgcagctcgagttcaaaaggatgaaggtataggacaagatatgcaagca
gtcctctcattagatgatggtggctggtcacgttgtgaagaggacatgcctgtgggaatt
ataaggcaaccattgccacctcctgtacttgctcaagttcagcctgcattgcatcctata
cccccatcaagagttgctgatccaagacctggaccagccaagccttcagaggatggaaca
cagagtcctaattcatttcaagatctgcatattcctgttaaaatgatggaagatttcttg
agactggctcaacaaaatacgaaaaagaatcttgaaacatgtggagttctagcaggttca
ctgaaaaatcgggtgtttcatattacttctttaattattccaaagcaagagtcaacttct
gattcttgtcagacattgaacgaggaagaaatttttgaggttcaggacagagaatcactt
tttcctcttggatggattcatacacaccctacacagacatgtttcatgtcatcagtggac
ttgcatactcattactcatatcagatcatgttaccagaatctattgcaatcgttatggca
cctacagattcttccagtccgcatggaatatttcacttgtccgatcctggaggtgtttct
gtgatccggaactgccagcagcgtggatttcatcctcatgaagaaccatctgatggcagc
ccactctatgaacactgttcacatgtttatatgaacccaaaattgaggtttgatgtggtc
gatctgcgataa
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