Beta vulgaris (sugar beet): 104888041
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Entry
104888041 CDS
T03548
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bvg01009
]
104888041
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bvg04131
]
104888041
Protein phosphatases and associated proteins [BR:
bvg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104888041
Membrane trafficking [BR:
bvg04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
104888041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
104888041
NCBI-ProteinID:
XP_010671164
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All DBs
Position
3:2279183..2300439
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AA seq
1036 aa
AA seq
DB search
MESRPSLSGRFNIEAATTSTSTSSSSPPSRENSISRTSSNSSLSSKSVFEHNLSSILNNP
HSSRSSDASSWLGWWSSSTSVPLPEFSPINTSKPELDANKSDFQPYLSSISEHYARFEDI
RNHSSQENVDIIESIGGQGEALVACLREVPALYFKEDFELEDGATFRAACPFSTMNENLV
LQERLSQYLDVVEMHLVKEISLRSNSFFEAQQQLGDLNVKIVEGCKRIRELKETIRLLDA
DVVGSARQIQEFSSMRSNLLSLQQKLRLILYVNQALGALKLLVASADCAGALDIADDLRQ
LLDGDELTGLHCFRHLRDHVAASMDSINSILSEEFLRASLHDAGNLDVVIVSRAKERASV
PNNGILDDVKLDEEETSSFRDCVLPIIIGLLRTAKLPSVLRLYRDTLTADMKTAIKTAVA
ELLPVLIIRPLESEFSTGEKTSDADGGGSSLASRLRSLSSESFVQLLTAVFKLVLAHLVR
AAEVKKSIEWIMSNLDGHYAAESVAAAIAHGAAASEAAQDSDNHQINSAAAYSSQRNATK
VSSFQGKANELSTSNVSKNFRADVLRENAEAVFAACDAAHGRWAKLLGVRALLHPKLRLP
EFLGIYSITQEFINSTEKIGGRLGYSIRGTLQSQAKAFIDFQHESRVAKIKAVLDQETWS
EVDVPDEFQAIVASMLSSDSLLTEISGDDQGSVVISNNGVSTVVDNIKVSTGEDHMERTN
LNNVSDDALTQEKSQHLGEANDASKPDAVASAHSKNSNTKDLRKSTSQTLICRGVGYHMV
NCGLILLKMLSEYIDMNDSLPSLSSEIVHRVVEILKFFNTRTCQLVLGAGAMQVSGLKSI
TSKHLALASQVISFTYAIIPDVKRTLFLNVPETRKPMLQSEIDRVAQDYKIHRDEIHTKL
VQIMRERLLVHLRGLPQIVESWNKPDDIDTQPSQFAKSLTKEVGYLQRVLSRMLHEADVQ
AIFRQVVIIFHSQISEAFSRLEISTPQAKSRLYRDIQHVLGCIRSLPTDIASKSGVANWG
HLDDFLAQRFDSEGDP
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggaatctcgaccttccctttcgggaaggtttaacatcgaagcagcaacaacgagtact
tcaacatcatcatcttcaccaccatcaagagaaaatagtatctcaagaacaagttcaaat
tcatctctttcaagtaagtcagttttcgagcataatctttcatcaatacttaataatcca
cactcttctcgatctagcgatgcttcttcatggcttggatggtggtcttcttcaacctcg
gtacctttgcctgaattttccccaattaatacgtcgaaacctgaattagatgctaataaa
tctgattttcaaccgtatttgtcttcgatctctgagcattacgctcgatttgaggatatt
cgtaatcatagtagtcaggaaaatgttgatattattgagagtattggaggacaaggtgaa
gcattagttgcttgcttgagagaagtgcctgcattgtattttaaggaggattttgagctt
gaagatggggcgacgtttcgcgctgcttgccctttctcaacgatgaatgaaaatttggtg
cttcaagagaggttgtcacagtatttggatgtggtggagatgcatttggtgaaggagatc
tcgttgcggtcgaattctttctttgaggctcagcagcagctgggggatttgaatgtgaag
attgttgaagggtgtaagaggattagggaattgaaggagacgattaggctgttggatgct
gatgttgtcgggtccgcgaggcagattcaggagtttagttcaatgaggagcaacttgttg
tcgcttcaacagaaactcaggcttatattatacgttaatcaagctcttggcgctctcaaa
ctgcttgttgcatctgctgattgtgcgggagcattggatatcgctgatgatttgcggcaa
ttactggatggggatgagctgacgggtttgcattgttttcgtcatctgcgtgaccatgtt
gcagcatcaatggactccataaacagcattctatcagaagaatttttgcgtgcatcttta
catgatgctgggaatttggatgttgtcattgtatccagagcaaaagaaagagcttctgta
cccaataatggaatacttgatgatgttaagttagatgaagaagaaacatctagtttccga
gattgtgttttaccaattataattggattgctgagaacggcaaaactaccatcagtcctg
agactgtaccgcgatacacttactgctgatatgaaaacagctattaagactgctgtagca
gagttgctaccggttctgattattcgacctttggagtcggaattttcaactggagagaag
acaagtgatgcagatggtggaggttcatctcttgcgagtaggttaaggagcctttcatct
gaaagctttgtccaacttcttacagctgttttcaaacttgtcctggcacatttagtgcgg
gcagctgaagttaaaaagtccattgagtggatcatgtctaatctggatggtcactatgca
gctgagtccgttgctgctgctattgcacatggtgctgcagcttcagaggctgcacaagat
agtgacaatcatcaaataaattctgcagctgcatattcttcccaaagaaatgctaccaag
gtttcatcatttcaagggaaggcaaatgaactaagtacatcaaatgtatcgaaaaatttt
cgagctgacgtgttgcgagaaaatgctgaagctgtctttgcagcttgtgatgctgcccat
ggaaggtgggcaaagctcctaggtgttcgggctcttcttcatccgaaattacggttgcca
gaatttcttggtatatacagcatcacccaagagtttataaattctacagaaaagattggt
ggaaggttgggatatagtatacggggtacgttgcagtcacaagcaaaagcctttattgat
tttcagcatgaatctcgtgtggcaaaaatcaaggcagtgttagatcaagaaacatggtct
gaagtggatgttcccgatgagtttcaagccattgttgcttcaatgcttagctcagattct
ctgcttactgagatctctggtgatgatcaaggtagtgtagtaatctcaaacaatggtgtg
tcaactgtagttgacaatatcaaagtatccaccggggaggatcatatggaacggactaat
ttgaacaatgtttctgatgatgctttgactcaagagaaatctcagcatttaggtgaggca
aatgatgcaagtaaacctgatgctgtcgcttctgcccacagcaaaaatagcaatacaaag
gacctccgaaagtcaacttctcaaacattaatatgcaggggtgttgggtatcacatggtt
aactgcggcttaatattgctgaagatgctgtcagagtatattgatatgaatgatagttta
ccatcactttcatcagaaatagttcaccgtgttgtagaaattttgaagtttttcaacaca
aggacttgccagctagttcttggtgctggcgccatgcaggtgtctggtctgaaatcaatc
acttccaaacatttggcattggcaagtcaagtaatcagttttacctatgccattattcct
gatgtcaagcggactctttttctcaatgtaccagagaccagaaaaccaatgttacaatca
gagattgatcgggtggcacaggattataagattcaccgggatgagatacatacaaagttg
gttcagattatgagagagaggttgttggttcatctgcgagggttgcctcaaattgttgag
agttggaacaaaccagatgatattgacacacaacctagtcaatttgcaaaatcactaaca
aaggaagttggctatcttcaacgtgtcttatctcggatgcttcatgaagcagatgttcag
gcaattttcaggcaagtggtcataatattccattcacaaatttcagaagcattttcacgc
ttggagatcagcactccacaagcaaaatccaggctttaccgggacatccaacacgttctt
gggtgcattcggtcactacctactgatattgctagcaagtccggtgttgccaattggggg
caccttgatgattttttggctcaaagatttgatagtgaaggtgatccatag
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