Beta vulgaris (sugar beet): 104888138
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Entry
104888138 CDS
T03548
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104888138
Enzymes [BR:
bvg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104888138
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
104888138
NCBI-ProteinID:
XP_010671318
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Position
1:5866560..5876143
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AA seq
641 aa
AA seq
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MSLQAVQLTVHDHYVVLDNGILEITISNPDGIITKIKYNSLANLLEETNEEDNRGYWDLN
WSDVGSTGTTGYYDRIKGTKFEVVVEDEEMVELSFTRTWNSSSKDKLVPLNIDKRFIMLQ
GSSGFYSYAIYEKLKEWPGFNLPQTRAVFKLNKKWFQYMAVADNRQRKMPLPDDRLPERC
QVLDYPEAVLLTNPIEQEFKGEVDDKYQYSCEDKDLKVHGWICTDPPTGFWQITPSDEFR
TGGPFKQNLTSHVGPINLAMFMSAHYAGEDMVAKFAQGEAWKRVFGPVFTYFNCVPKELD
CQCLWEDAKDQVLVETENWPYSFPASEDFPTSDQRGNLTGRLLVHDRYTCDDSMPADGAY
IGLASPNETNSWQLEGKGYQFWTTTDEDGYFFINDIRAGDYNLYAWVPGFIGDYVCDNHI
SINSGDEIDMGELVYEPPSDGPTLWEIGVPDRTAREFYVPDPNPKYVNKLYLNHPDRFRQ
YGLWERYAELYPNEDLVYTIGESNYQKDWFFAQVTRKKGNTYQGTTWQIKFKLEDVNQNG
VYKLRIALATANLAELQVRVNDAKANPPEFTTGLIGKDNAIARHGIHGLYRLFTADIHGT
KLVQGDKYNTIYLTQAKGGTPFVGIMYDYIRLEGPPDTTDD
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtcactccaagcagtccaacttacagtgcatgatcattatgttgttcttgataatggt
atacttgaaatcacgatatcgaatccagatgggatcatcacaaagataaagtacaacagt
ttagcgaatttgcttgaagaaacaaatgaagaagacaatagagggtattgggatctaaat
tggagtgatgttggatcaacaggaacaacaggatattatgataggattaaaggaacaaaa
tttgaagttgtagtagaagatgaagaaatggtggaattatccttcacaagaacatggaac
tcttcatctaaagacaaacttgtgccattaaacatcgacaaaagattcataatgcttcag
ggatcatcagggttctactcctatgctatatatgagaaattgaaggaatggcctggattt
aatcttcctcaaacaagggctgttttcaagcttaataagaaatggtttcaatatatggct
gtagcagataacaggcaaagaaaaatgccacttccagatgatcgattaccagaaagatgc
caagttctagattaccctgaagcagtacttcttacaaatcctatagaacaagaatttaaa
ggagaggtggatgacaaataccagtattcatgtgaagataaggatcttaaagtccatgga
tggatatgcacagatccacctacaggattctggcaaataacacctagtgacgaattccga
actggtggccccttcaagcagaatcttacctctcatgttggccctatcaaccttgctatg
tttatgagtgcccattatgctggggaggacatggtggcaaaatttgcacaaggtgaggca
tggaaaagggtatttggtccagtttttacctacttcaattgtgtgcccaaggaacttgat
tgccaatgtttgtgggaggatgcaaaggaccaggtattggtagaaacagaaaattggcca
tactcttttcctgcttctgaggatttcccaacttctgatcaaaggggtaaccttactggt
agattactagttcatgacaggtatacttgtgatgattctatgccagcagatggagcatat
ataggcttagcttctcctaatgaaacaaattcttggcaactggaaggcaagggttatcag
ttttggacaacaacggatgaggatggctatttcttcataaatgatataagagctggtgat
tataatctttatgcttgggttcctggcttcataggagactacgtatgcgacaaccatatt
tctataaattcaggtgatgagattgacatgggggagcttgtgtatgaacctccaagtgat
gggccaacactatgggaaattggtgttcctgatcgaacagctagagaattttatgtacct
gatcccaacccaaagtatgtcaacaaactctacctcaatcatcctgacagatttagacag
tatggtctatgggaaagatatgccgaattatatcctaatgaagatctagtctatacaatt
ggagaaagtaattaccaaaaagattggttctttgctcaagtcacaagaaaaaaggggaat
acgtaccaaggaactacatggcaaatcaagttcaaacttgaggacgtgaaccaaaatgga
gtctataaattgagaattgcacttgcaactgcaaacctagcagaattacaggttcgagta
aacgatgcaaaagcaaaccctccggaattcacaacaggactaatagggaaagataacgcg
attgcaagacatggaattcatggactttacagactattcactgcagatatacatggaact
aagcttgtacaaggtgataaatataatacaatctatttgactcaagcaaaaggtgggact
ccttttgttggtatcatgtatgactacattcgtcttgaaggaccgccagatactactgat
gattaa
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