Beta vulgaris (sugar beet): 104888152
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Entry
104888152 CDS
T03548
Name
(RefSeq) rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104888152
Enzymes [BR:
bvg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104888152
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
104888152
NCBI-ProteinID:
XP_010671338
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Position
1:5879534..5887208
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AA seq
659 aa
AA seq
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MSKTNSWMCGCCGGGGVEPGPDAPTAQAVQLQILDRYVVLDNGIARVTISKPGGIVTGIA
YNGIDNLLESRNVEDNRGYWDLVWNDDTTPGTFDTIKATNFQVIMSNDDQVEVSFSRQWD
PSLKGKLVPLNIDKRFIMLRGSSGFYTYAIYEHMNDWPSFSMGETRITFKLNKQWFHYMA
IADNRQRFMPLPDDRMPGRCEKLAYAEAVLLTNPIEPELKGEVDDKYQYSCDNKDILVHG
WISTDQPTGFWQITPSYEYRSGGPVKQNLTSHVGPTSLSVFYSGHYAGDALVPKFGDGEP
WKRVFGPVFIYCNSCPKDVDFHQLWEDAKHQLMLQTQSWPYSFPASEDFPKPNQRGKVRG
KLVVRDRYVSDDHIPASGAYVGLAVLGPPGSWQTEIKGYQFWTTADENGCFSINGIREGD
YNLYAWVPGVIGDYRYDAVITITAGCDADMGDLVYEPLRDGPTLWEIGIPDRTAAEFFAP
DPNPNYVNQLYVNHPNRFRQYGLWERYAELYPNEDLVYTIGVSDYRKDWFFAQVPRKVEN
GFVGTTWQVRFKLDKVDQNGIYKLRLAIASATLAEVQVRVNDPKANRPVFTTGLMGRDNS
IARHGIHGLYWLYNVDIQGSKLVQGDNVLYLTQPRNQSPFQGILYDYLRLEGPPTNSAI
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaacgaattcatggatgtgtggatgttgtgggggtggaggagttgagccaggc
ccagatgcaccaactgctcaagctgttcagcttcagattttggatcgttatgtagtattg
gacaatggcatagctcgagtgacaatatcgaaaccaggaggaattgtcactggaatagct
tataatggcattgacaacttgcttgaaagtcgaaatgttgaggacaatagagggtattgg
gatcttgtttggaatgatgatactacaccagggacatttgacacgattaaagcaacaaat
tttcaggtgattatgtcaaatgatgatcaggtggaagtttcctttagtagacaatgggat
ccctcacttaagggcaagttagttcccttgaacattgataaaaggtttattatgctgcgc
ggctcatctgggttctacacctatgctatctatgagcatatgaacgattggcccagcttc
agcatgggcgaaactaggatcacatttaagctcaacaagcaatggtttcactacatggca
attgcagataacaggcaaaggtttatgcctttgcctgatgatagaatgcctggaaggtgc
gaaaagcttgcctacgctgaagctgttttgcttacaaaccctatagaaccagaactcaaa
ggagaggttgatgacaagtaccaatattcatgtgataacaaagacattctagtccatggc
tggatttccactgaccagcctacagggttttggcaaatcacaccgagctatgagtatcga
tctggtgggcccgttaaacaaaatttaacgtcccacgtggggcccacatcattatcagtg
ttttatagtggacattatgcaggggacgctctagtgccaaaatttggtgatggagagcca
tggaaaagggtctttgggcctgtttttatctactgtaattcttgtcctaaggatgttgac
tttcatcagctttgggaagatgctaaacatcagttgatgctacaaactcaaagttggcct
tatagtttcccggcttcagaggattttccaaaacctaatcaaaggggtaaagttcgtggc
aaattagtagttcgggacaggtatgtcagtgatgatcatataccagcaagtggagcttat
gttggattagccgtactaggacctcctggatcatggcaaactgaaatcaagggttatcag
ttctggacaacagcagatgagaatggctgtttttctatcaatggcatacgagaaggcgac
tataatctctatgcttgggttcctggtgtcattggagactatagatatgatgctgtcatt
accataactgcagggtgtgatgctgatatgggtgacttggtgtatgagcctcttagagat
ggaccaactttgtgggaaataggaattcctgatcgtactgcagcagaatttttcgctccc
gatcctaatcctaattatgtcaatcaactttacgttaatcatccaaacaggtttaggcaa
tatggattatgggagagatacgcagaattataccctaatgaagatcttgtttacacgatt
ggtgttagcgattatcgaaaagattggttctttgctcaagttccaaggaaagtagaaaat
gggtttgtgggaacaacttggcaagtcagattcaaactggataaggtagatcaaaatggg
atctacaaattgagattggcaattgcttccgcaacccttgctgaagtacaggtacgcgta
aacgatccaaaggcgaatcgacccgtatttacaactggattaatggggagggataactca
atagcaagacatggtattcatggcttatattggctctacaacgtggacatacaaggctca
aagcttgtacaaggcgataatgttttatatttgactcaaccaaggaaccaaagtccattc
caagggatattgtatgattatttacgtttagaaggccctcctaccaacagtgcaatctaa
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