Beta vulgaris (sugar beet): 104888199
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Entry
104888199 CDS
T03548
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104888199
Enzymes [BR:
bvg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104888199
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
LEA_2
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
104888199
NCBI-ProteinID:
XP_010671398
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Position
1:5944443..5954373
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AA seq
903 aa
AA seq
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MDGLPRPPAHGKYDFHTNRPRQQKTSFIKWFCIAFGLILLLSLGIYAITLLVVFKKAQVP
NFQVKNVQVSKFSVAHVLTDQEKVLSTNLEFFFESDNKNPLLGVDFGNMVMETTWDDIEA
HLGETHVQNFVQKSKGVSTLKVSTKGEVELTKDVKKEDLKLDLFLSGNLKFFSGPFNTKV
FPFMISCNDISGVSTNAACDSKMFTTGKPQKPTPAKKPKPPTPKAKPAPAVGEPPAEEPT
AGAPAAEAPAAKEPAAAEGPTPPPPESFPPVKLTIQDKSVIMDNGFLQATISKPAGYVTG
IKYNGIDNILDTVNPEDDRGYWDVVWAPPGTKGTKGNFQRIIGTEFRVIIDREDQLELSF
KILYDPAKDAKKAAPMEIDQRYVMLRGVSGIYAYGIFERAAWAPFGMPNARLAFKLQRQQ
FRYMVIADNRQREMPVPEDRMKPRGQELAYPEAVLLVDPTDAKFKGEVDDKYQYSEESQD
IRVHGWICRDPPSGFWQITPSFEFRSGGPNKQFLTSHVGPSTLAMFVSAHYSGEELVPKF
EEGEPWNHIYGPIFMYMNNATKQENISMLWDDAKRKMSSEVEKWPYSFPASEDFPKANER
VNVTGKFFVHDKYKSKEREPAKNAFIGLGPPGEAGSWQRDCKTYQFWTQTNEEGSFTIPF
VRVGSYNLYGWVDGFIGDFKHDTPINISIGKNVDVGEVVFEPPRDGPTLWEIGIPDRVAQ
EFHIPDPNPKYVNKLYVNHPDRFRQYGLWERYSELYPKDDLVYDVKASNYSKDWFYAQVT
RPIGARYNGTTWTVKFSLDNVESGATYKLRVAIASATNSDLEIRFNKAKPNPPIFKTGRI
GNDNSIARHGIHGLYWLYNVDVKGSELNKGDNTLLLTQTKGVSPFQGIMYDYLRLEGPPT
SPK
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggatgggctcccaagaccacctgcccatggcaagtatgacttccatacaaataggcct
aggcaacaaaagaccagtttcataaaatggttttgcatcgcttttggtctaatacttcta
ctttcattgggtatttatgccataaccttattagttgtcttcaaaaaggcgcaggtgcca
aatttccaggttaaaaatgtacaagtttcgaaatttagtgttgctcatgtgttaaccgat
caagaaaaagtattatcaactaatcttgaatttttctttgaatccgacaacaaaaaccct
ttacttggtgttgattttgggaatatggtgatggagacaacttgggatgatattgaggca
catttaggagaaacacacgtccaaaattttgtgcaaaagtctaagggtgtatcaacgtta
aaggttagtaccaaaggtgaggttgaattaacaaaggatgtgaaaaaggaggatttgaag
cttgatttgttccttagtgggaatcttaaattcttttctggtcctttcaacaccaaagtc
tttcctttcatgatctcatgcaatgatatttctggtgtttcaactaatgctgcttgtgac
tccaaaatgttcaccacaggcaaacctcaaaaaccaacaccagccaagaagcctaagcca
ccaacaccaaaagcaaagccagctccagctgtgggagagccacctgcggaagagccgact
gctggagcgccagcagcggaagcaccagctgctaaagagccagctgccgcagagggccca
acgccaccaccaccggagtctttcccaccagtcaaactcaccatccaagacaaatctgtg
ataatggataatggatttctgcaagccacaatttccaaaccagctggatatgtcactggc
attaaatacaatggaattgataacattcttgatacagttaatccagaagatgatagaggg
tattgggacgttgtttgggctccaccaggtacaaaaggaaccaaaggaaattttcagagg
ataataggtacagaatttcgagtaattattgacagagaagatcaattagaattgtcattt
aaaatactatatgatcctgccaaagatgctaaaaaggcagctccaatggaaatagatcaa
aggtatgtgatgctccgtggagtatcaggcatttacgcctacggtatttttgagagggca
gcttgggctccttttggtatgccaaatgctaggcttgcttttaagcttcaacgacaacag
tttagatacatggtgatagcagataataggcaaagagaaatgcctgttcctgaggatcgt
atgaaacctagaggtcaagagcttgcttatcctgaagcagtcttgttggttgatcctact
gatgcaaagtttaaaggagaggtggatgacaagtaccagtactcagaggaaagccaagac
attcgggtgcatgggtggatctgtagagacccgcctagtggattctggcagataactccc
agctttgagttccgttcgggagggcccaataaacaattccttacctctcatgtcggccca
tccacccttgctatgttcgtaagtgctcactattcaggagaggagctagtcccaaaattt
gaagaaggagaaccatggaaccatatttatggtcctatttttatgtatatgaataatgca
accaagcaggagaatatttctatgctttgggatgatgctaaacgaaagatgtcatctgaa
gtcgaaaaatggccatacagcttcccagcatcagaagatttccccaaagccaatgaaaga
gttaatgttactggtaaattttttgttcatgacaaatataaaagcaaagaacgggaacca
gccaaaaatgcttttatcggattgggccctccgggagaggcaggatcttggcaaagagat
tgcaagacttatcaattttggacacaaacaaatgaggaaggaagtttcacaattcctttt
gtacgtgttggaagctacaatctttatggttgggtcgatggttttatcggggactttaaa
cacgatactcccatcaacataagcataggtaaaaatgtggatgtgggtgaggttgtgttc
gagccaccaagggatggaccgaccctatgggaaataggtattcccgatcgtgttgctcaa
gagttccacatccctgatcctaatccgaagtatgtgaataaactctatgtcaatcaccct
gacaggtttaggcaatatggtctatgggaaagatactcagaattgtatccaaaggatgac
ttagtctatgatgtcaaggccagtaattactcaaaggattggttctatgctcaagtcaca
aggcccataggtgcaaggtataacggaaccacatggacagtgaaattcagtctcgataat
gtggaatcgggtgcaacctataagctcagagtggcaattgcctcggccaccaattctgac
ttggagattcggttcaataaggcgaaaccaaatcctccaatcttcaaaacagggagaata
gggaatgataattcaattgcaagacatggtattcatggactttattggctttacaacgtt
gatgtaaaaggaagtgaactcaacaaaggcgacaatactctattattgactcaaacaaag
ggagttagcccattccaagggattatgtatgattatcttcgtcttgaaggccctccaact
agtccgaaatga
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