KEGG   Beta vulgaris (sugar beet): 104888413
Entry
104888413         CDS       T03548                                 
Name
(RefSeq) bromodomain and WD repeat-containing protein 1
  KO
K11797  PH-interacting protein
Organism
bvg  Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:bvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bvg04121]
    104888413
Ubiquitin system [BR:bvg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     104888413
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_SCAP WDR55 WD40_MABP1-WDR62_2nd Bromodomain Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_HPS5 VPS8_N Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N Beta-prop_IP5PC_F Auxin_resp
Other DBs
NCBI-GeneID: 104888413
NCBI-ProteinID: XP_010671678
LinkDB
Position
3:complement(6209340..6232742)
AA seq 1693 aa
MLNKGHMALEKRIPASSQTVNVKPLSFPLKVREKAVLVDPEMNVDMEADVDVDHREVYFL
IMHFLSSGPCQRTCGQFWNELLEHDLLPRRYHAWYSRSRVPSGDENDDGLSFPLSYNKVV
ERHAHIGKDHLLKLLKQLLLSKAKLPHSIAARGVPNAADVPTLLGTGSFSLLGYDGNKGD
NEVKPPPIHMRWPHLQADQVRGLRLREIGGGFARHHRAPSTRAACYTIAKPSTMVQKMQN
IKKLRGHRSAVYCAVFDRSGRFVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSS
NNSLVASSSNDCVIRIWRLPDGQPISVLRGHTGAVTAIAFSPRPSAVYQILSSADDGTCR
LWDARYSQFKPRIYLPRSPDSAAGKSITASSTAGEQSHQIFCCAFNASGTVFVTGSSDNF
ARVWNACKSGADDSEQPIHEMDVLSGHENDVNYVQFSGCAVASRFSAADAAKEENFPKFK
NSWFAHDNIVTCSRDGSAIIWIPRSRKSHGRSGRWTRAYHLKVPPPPMPPQPLRGGPRQR
VLPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNP
RIAMSAGYDGKTIIWDIWEGKPIRTYEIGRFKLVDGKFSSDGTSIILSDDVGQLYILSTG
QGESQKDAKYDQFFLGDYRPLIRDTHGNVVDQETQLPPYRRNMQDLLCDSSMIPYPEPYQ
SMYQQRRLGTLGIEWRPSSVRFAVGPDFTSDQDHILPLPDLDEFIDPLPEFVDAMEWEPE
VEVISDDADSEFNVADSIGGDGEHISSTSSDDSECGEEDSDPECSHRDSVRRSRRRKKKR
ETEITTSSGRRVKRRNFDECDDSSHRIVENRKARNGRKWSKKKSSKASRPQRAAARNALT
LFSKIKGCAPDQDEYNSEGDSSGSESMLEDSNFEDEESDKVVPDERAKNLKGKEVIVDES
EDVPSSEEFPASREDAWNRKRLVLKFPVRDSNRGLFSGNPIPTSGNLTDLVGSSSSTSGG
PVEVDGKDLMQLDVNKLYGNANLCDGYDRLGWLGGYGNGSMKWGGVRARTNKRIKLSEVP
PLNASGSSSFSDNADSKSLIEERDVNGTLQETSQFGHEHLGNTDGLTDAKKVELSDSNKS
LVSNGVQDEVHVATENGAPCLKSRDDNNGSTWLRNATEKTVSEPNNSSAIKSTPGERNRM
SLLEQRSDAEELEKENHHHKAGLDGGDCNGAPKMVGVEEHASSLLLNSQAPHSQKKDRMY
SAVYRRSRSFKAARTPSDGNGAHIGENTSNTSCQSLNRNVDTNGTMVDGINQSHSVELRD
TTEELVNHERSVERSRRTENSSLNKFARRPREEWGSSMTVGLRSTRNRRINFVRDASPVD
RRRSGQSLRKISWLMLSVPDCSRYIPQHGDEVVYLRQGHEEYISCNNSSMRRPWEHLKGE
VRAVELCKVVELEYSIVPGSGESCCKMILEFIDPDSSVFGKIFKLTLPEVSDFPDFLVER
MRYETAIERKWTKRDKCQVWWRNEGDADGSWWEGRINDVKAKSPEFPDSPWEIYEIRYRS
DPTETHHHSPWELHDANDTQWEQPHLDDHTTKILLSSLSKLMQSRNRAQDIYGVQKLQQV
SMKSNFLNRFPVPLSLEVIQSRLENNYYRSLDAVKHDINIMLSNAESFFGKNAELSRKIE
RLSDWFAKKLSTL
NT seq 5082 nt   +upstreamnt  +downstreamnt
atgttaaataaaggacatatggctcttgagaaacgcatccctgctagtagtcagactgtt
aatgtgaaacctttgagtttccctcttaaggtccgggaaaaagctgttcttgtggatcca
gagatgaacgttgacatggaggctgatgttgatgttgatcacagagaagtttatttcctc
attatgcatttcttgtccagtgggccatgtcaaagaacttgtggacaattttggaatgag
cttcttgagcatgacctactaccaagaagataccatgcttggtattcaaggagtagggtg
cctagtggtgatgagaatgatgatggcttgtcatttccactgagttacaataaagtagtg
gagcggcatgctcatatcggaaaggatcacttactaaagcttttgaaacagctattactt
agtaaagctaaactaccacatagcatagctgctagaggtgtacctaatgcagctgatgtt
cccacacttctgggaacaggatccttttcactcttgggctacgatgggaacaaaggagac
aatgaagttaaacctccgcctattcacatgcgttggcctcatttgcaagctgatcaggtt
cgcgggctgaggttgagagaaattggtggtggttttgcgagacaccaccgagcaccatct
acccgtgcagcctgctatactattgcaaaaccgtcaacgatggtgcaaaagatgcagaat
attaagaagctaaggggacaccggagtgctgtttattgtgctgtatttgatcgatcgggg
agatttgtcattactggatcagatgaccgccttgtgaaaatttggtccatggaaactgcc
tattgcttggctagctgccgtgggcacgaaggtgacataaccgacttggctgtgagttcc
aataattctttggtggcttcttcttcaaacgactgtgtaattagaatttggcgtttgcca
gatgggcagccaatttcagttctgcgtgggcatacaggagcagttactgccattgctttt
agtccaagacctagtgctgtataccagattctctcgtcagctgatgatggaacatgtaga
ttatgggatgcaaggtactcccagttcaagccacggatctatcttcctagatctcctgat
tctgctgcaggaaagagcatcaccgcttcttctactgctggggaacagagtcatcagatc
ttttgctgtgcattcaatgccagcggcactgtctttgtcaccgggagctcagataatttt
gctagggtctggaatgcttgtaaatctggtgccgatgattcagaacaacctatccatgag
atggatgttctgtctggccatgaaaatgacgttaactatgtgcagttcagtggctgtgct
gtggcttctcgattctctgccgctgatgcagccaaggaggaaaattttcccaaatttaaa
aactcatggtttgctcatgataacatagttacctgttcccgtgatggaagtgcaatcatc
tggattccgaggtcacgtaaatcacatgggagatctggacgttggactcgggcatatcat
ctcaaggttcctcctcctcccatgcccccgcagcccttacgagggggcccaaggcagaga
gttttacctacacctcgtggtgttaatatgattgtttggagcctagataatcggtttgtc
cttgctgctattatggattgcagaatatgcgtatggaatgctgctgatggaagtttggtt
cattctttgacgggtcatacggagtctacatatgtcctggatgttcatcctttcaaccct
cgcatagctatgagtgctggctacgatgggaaaaccataatctgggatatttgggaagga
aagcccattcgtacttatgaaattggccgctttaaactggttgatggaaagttttcatcg
gacgggacctctattatactctcagatgatgttggtcaactttatatcttgagcactggc
caaggtgagtcccaaaaggatgcaaagtatgatcagttctttctcggggattatcggcca
cttatccgggatacccatgggaatgttgttgatcaggaaacccagctgccaccttacaga
agaaacatgcaagatcttctttgtgattcaagcatgattccatacccggaaccctaccag
agcatgtatcagcaaagacgtcttggaactttgggcatcgaatggcgtccatcttctgta
aggtttgctgtgggtccagacttcacttctgaccaagaccatattctacccctgccagac
ttggatgaatttattgatccactgccggagtttgtagatgccatggagtgggaaccagaa
gtagaagtaattagtgatgatgctgactctgagttcaatgttgcggattccattggtggt
gacggagaacatattagctcaacatcttccgatgattcagaatgcggggaagaagacagc
gatcccgaatgcagtcatagagatagtgttcgcagatcaaggaggagaaagaaaaagaga
gaaacagagataactacttcttcggggaggcgtgttaagagaagaaatttcgatgagtgt
gatgatagttcgcacagaattgttgaaaacaggaaagcaagaaatgggcgaaaatggtca
aagaagaagtcttcgaaagcttcaagacctcagagagctgctgctcgtaatgctcttacc
ttattttccaaaatcaaaggttgtgctccagatcaagatgaatacaattcagaaggtgat
tcatcaggaagtgaatccatgcttgaagattctaacttcgaggatgaagaatctgataag
gttgttccagatgagcgggcaaagaatctgaaaggaaaagaagtaattgttgatgaatca
gaggatgtacctagttctgaagagttccctgcatctcgtgaggatgcatggaacagaaaa
agactagttctgaaatttccagttcgcgattcaaatagaggtttattttcaggtaaccca
atcccaacctccggaaatctgacagatttggtaggctcttcatcttcaacatcaggtggt
cctgtagaagttgatggaaaagatttaatgcagctggatgtaaataagttatatggcaat
gcaaacctttgtgatgggtatgatagattgggttggcttggtggatatggaaacggttct
atgaaatggggaggggtcagggctcgtactaataagcgaattaagttaagtgaagtccct
ccgttgaatgcttctgggtctagctctttcagtgacaatgcagattcaaagtctttaatt
gaagagagagatgttaatggcacattgcaggaaactagtcagtttggtcatgagcattta
ggcaatacagatggattaactgatgcgaaaaaagtagagctatctgattcaaataaatcc
ctggtctctaatggagtgcaggatgaagtccatgtagctactgaaaatggagctccgtgc
ttgaagagtcgtgatgacaacaatgggtcaacatggttgagaaatgctacggagaagact
gtgtctgaaccaaacaattcttctgctataaaatctacgccgggtgaaagaaataggatg
tctttgttggagcaaagatctgatgctgaagagcttgagaaggaaaaccatcaccataaa
gctggtcttgatggtggagattgtaatggagcaccaaaaatggtcggagtagaagaacac
gctagctctctattactaaattcacaggctccacattcacagaaaaaagataggatgtac
agtgctgtgtatagaagatcaaggtcatttaaggcagctaggacaccttcagatggcaat
ggtgctcatattggtgaaaatacctcaaatactagctgtcagagtctgaatcgaaatgtt
gatacaaatggaactatggttgatggcattaaccagtcccattctgtggagcttagggac
acaactgaagagcttgttaaccatgagagatcggtggagaggtcaagaaggaccgagaat
tcttcattgaacaagtttgctcgacgtcctcgagaagagtggggatctagcatgactgtg
ggactgaggtctacgagaaataggagaattaatttcgttcgtgatgctagtccagtagat
aggaggaggtcaggtcagtctctaagaaagatttcctggctgatgctttctgtgcctgat
tgttctcgatacattcctcagcatggagatgaagttgtttatttgagacaggggcatgaa
gaatatatatcatgcaataactcttctatgaggagaccttgggaacatttgaaaggagag
gtcagagctgtggagctctgcaaagttgtagagctagagtattccattgttccaggatct
ggagaaagttgctgtaaaatgatacttgaatttatagacccagattctagtgtatttggt
aaaatattcaagctgaccttgccagaagtttcagattttccagactttcttgttgagaga
atgaggtacgagactgctattgagagaaaatggactaagagggacaaatgtcaggtctgg
tggagaaacgaaggtgatgcagatggtagttggtgggaaggtcgaatcaatgatgtgaag
gccaaatcccccgagtttcctgatagtccatgggaaatatatgagattcggtatagaagt
gatcctactgaaactcatcaccacagtccttgggaactccatgatgctaatgacacacag
tgggagcagccccatcttgatgaccacaccacgaaaatactgctgtcttctctttctaaa
ttaatgcagtctcgtaatagagctcaggatatttatggggttcagaaattgcaacaggtt
tcaatgaagtcaaatttcttgaataggtttccagtgccattatctttggaagtaatccag
tcgaggctagagaataattattaccgaagcttggacgcagtgaagcatgatataaatatt
atgctgtcgaatgctgagtctttcttcggaaaaaatgcagagctttctaggaagattgaa
cggttatcagattggttcgcaaagaagttatcgacattgtag

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