Beta vulgaris (sugar beet): 104888738
Help
Entry
104888738 CDS
T03548
Name
(RefSeq) probable pectate lyase 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg00040
Pentose and glucuronate interconversions
bvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104888738
Enzymes [BR:
bvg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104888738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
104888738
NCBI-ProteinID:
XP_010672089
LinkDB
All DBs
Position
3:10144476..10149367
Genome browser
AA seq
436 aa
AA seq
DB search
MAVSSVSLLFLLCFITLVTALRTPPRSEKTEELQSLKNITMAEKLNEVEIYNEHAVADPE
EVVALVHMSIRNSTQRRNLGYFSCGTGNPVDDCWRCDRNWHKNRKRLADCGIGFGRNAIG
GKNGRFYVVTDPRDDDPVNPRPGTLRHAVIQEEPLWIVFQRDMVIQLKEELIMNSFKTID
GRGANVHIANRACITIQYVTNIIIHGIHVHDCKPTGNAMVRSSTTHFGWRTMADGDGISI
FGASHIWIDHNSLSNCADGLIDAVMGSTAITISNNHFAHHNEVMLLGHSDSYVRDKAMQV
TIAFNHFGKGLMQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYLAPANRF
AKEVTKRVETPANKWKGWNWRSEGDLMLNGAYFTASGAGASASYARASSLGAKSSSMVGT
ITANAGPLSCRRGRQC
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttcttctgtttctcttctttttcttctttgtttcatcactcttgtcaccgct
cttcgtactcctcctaggtctgaaaaaacagaggagttacagagcttgaagaacataaca
atggcggaaaagttgaatgaagttgagatatataacgaacatgctgttgctgatcctgaa
gaggttgttgccttggtacacatgagtatccgcaacagcactcagcgaaggaatttgggt
tatttctcatgtgggacaggaaatcctgtagatgattgctggcgttgtgaccgcaattgg
cacaaaaaccgtaaacgcctagctgactgtggtattgggtttggaagaaatgccattggt
ggcaaaaatggccgcttctatgttgtgacagaccctcgtgatgatgacccagtcaaccct
aggcctggaactcttcgccatgcagttatccaagaagagccactctggattgtttttcag
cgtgacatggtgattcagttgaaggaagagctcataatgaacagctttaaaacaattgat
ggtcgtggagccaatgttcacattgctaatagagcttgtatcacaattcaatatgtgacc
aacatcatcatccatggcattcatgtccatgactgcaaacccactggtaatgctatggtg
agaagttctactactcattttggatggcgaacaatggctgatggagatggcatctcaatc
tttggtgctagtcatatttggattgatcacaattctctctctaactgtgctgatggcctt
atcgatgctgtgatgggttcaactgccatcactatttccaacaatcactttgcacaccac
aatgaggtgatgctgttggggcatagtgactcttacgtgagagacaaggcgatgcaagtt
acaattgctttcaaccattttggcaaaggcctcatgcaaagaatgccaaggtgtcgtcat
ggttatttccatgtagtgaacaatgactacacccactgggaaatgtatgcaattggtgga
agtgcagagcccaccatcaatagccagggtaacagatatttagccccggccaaccgtttc
gcaaaggaggtgacaaagagggtggaaacgcctgcaaataagtggaagggttggaattgg
aggtccgagggagatctcatgttgaatggtgcatacttcactgcatctggagctggagcc
tcggctagctatgcaagagcctcaagcttgggagctaagtcatcttccatggttggaact
atcaccgctaatgcaggccctctctcctgccgcaggggccgccaatgctag
DBGET
integrated database retrieval system
