Beta vulgaris (sugar beet): 104889034
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Entry
104889034 CDS
T03548
Symbol
LOC104889034
Name
(RefSeq) sm-like protein LSM36B
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03018
RNA degradation
bvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104889034 (LOC104889034)
09123 Folding, sorting and degradation
03018 RNA degradation
104889034 (LOC104889034)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvg03019
]
104889034 (LOC104889034)
03041 Spliceosome [BR:
bvg03041
]
104889034 (LOC104889034)
Messenger RNA biogenesis [BR:
bvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104889034 (LOC104889034)
mRNA degradation factors
5'-3' decay
Lsm complex
104889034 (LOC104889034)
Spliceosome [BR:
bvg03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104889034 (LOC104889034)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
104889034
NCBI-ProteinID:
XP_010672471
LinkDB
All DBs
Position
3:17318785..17328062
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AA seq
92 aa
AA seq
DB search
MSTAGSEKGSANTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYV
NGQLKNKYGDAFIRGNNVLYISTTKRTLADGA
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgctggaagtgaaaaagggtctgctaacaccaaaacccctgcagattttctc
aaatccattcgcggtcgcccggttgttgttaaacttaattcaggggtcgattatcgtggt
attttagcttgcttggatggatacatgaacattgcaatggagcaaacagaagagtatgtt
aacggccagctgaaaaataaatatggtgatgcatttattcgtggaaacaatgtgctttat
atcagtacaacaaagaggacacttgctgatggagcatag
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