Beta vulgaris (sugar beet): 104889050
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Entry
104889050 CDS
T03548
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg00040
Pentose and glucuronate interconversions
bvg01100
Metabolic pathways
Module
bvg_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104889050
Enzymes [BR:
bvg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104889050
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
NosD
Motif
Other DBs
NCBI-GeneID:
104889050
NCBI-ProteinID:
XP_010672490
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Position
3:complement(15420329..15423929)
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AA seq
433 aa
AA seq
DB search
MEVTINILLLIFFIFLPPTLSKGERYNVINFGAKPNSETDSSDAISSAWKAACHVATNSL
VPPTIYVPKGRYLIGNALVFSGHNCKPILKNKGIILRIEGTLVAPVDYMVLGNAMNWLSF
ESVAGVTISGGSLDGQGTSLWACKANGNSNCPTGTTNLAFKNSKDILDNLFFWQNLAFKN
SKDIIINGLRSLNSQLFHIVINGCDNVQVQGLKILALGKSPNTDGIHVQQSNNVVIRHSK
IGTGDDCVSIGAGTINLMIYNVICGPGHGISIGSLAKNLNEPGVQNVTVADVVFKGTQNG
VRIKSWGRPSNGFVKNVLFKGITMNHVQNPIIIDQNYCPNNRDCPGQVSGIKISDIIYED
IHGSSATEVAVKFDCSPKYRCTNIKMANVKLTYKKQLATSSCSNAGGTVTGIVEPTSCII
ETTKLKFTGNNSL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggaagttaccattaacatattattgctaattttcttcatcttcctccctcctacatta
agcaaaggagaaaggtacaatgtcatcaatttcggggcaaaacccaactcggaaacagac
tcatcagacgcgatttcgagtgcatggaaggcggcatgccatgtagcaactaattcattg
gtaccaccaactatatatgtgcctaaaggaaggtacttaattggaaatgcccttgtgttt
tcaggccataattgtaagcctatactgaaaaataagggaatcatccttagaattgagggc
accttagttgctccagttgattacatggtcttaggaaatgcaatgaattggctctctttc
gagtcagtcgccggtgttaccatctctggtggttctcttgatggtcaaggtaccagtttg
tgggcttgcaaggctaacggaaatagtaactgcccaactggtactacgaatctggccttc
aaaaactcgaaagacattcttgacaatctgttcttttggcagaatctggccttcaaaaac
tcgaaagacattataattaacggtttaagatcactaaacagccaattattccacattgta
atcaatgggtgtgacaacgttcaagtacaaggcttaaaaatattagccttaggaaaatct
cccaacaccgatggcattcatgtgcaacaatccaacaatgttgttatcaggcattctaag
attggaacaggggatgattgcgtctctataggcgctggcacgataaatttgatgatctac
aacgtcatttgtggtcctggccatggcattagtattgggagcctagcaaagaatttgaat
gagccaggagtacaaaatgtgacagttgcagatgtagtgtttaagggtacgcaaaatggt
gttaggatcaaatcctggggaaggcccagcaatggtttcgttaagaacgttctcttcaaa
ggcatcactatgaatcatgttcaaaatccaattattattgatcaaaattattgcccaaac
aatagagattgtcctggccaggtttcaggtataaaaattagtgacataatatatgaagac
atccatggatcatcagcaaccgaagtcgctgtaaagtttgattgcagcccaaagtatcga
tgcacaaacattaaaatggcgaacgttaaacttacatataagaagcaattagctacatca
tcttgtagtaatgctggaggaacagttactggcatcgtcgagccaactagctgcattata
gagactactaaactaaaatttacgggcaataattcattatga
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