Beta vulgaris (sugar beet): 104889365
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Entry
104889365 CDS
T03548
Name
(RefSeq) ABC transporter A family member 1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104889365
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bvg02000
]
104889365
Transporters [BR:
bvg02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104889365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
ABC2_membrane
RsgA_GTPase
AAA_23
AAA_29
Motif
Other DBs
NCBI-GeneID:
104889365
NCBI-ProteinID:
XP_010672865
LinkDB
All DBs
Position
3:20970383..21004958
Genome browser
AA seq
1870 aa
AA seq
DB search
MAESKRQLKAMLRKNCLLKIRHPYVTFAEIFLPTIVMLMLMAVRTQVDTRVHPAQPYIRK
DMLVEVGKGDVSNPFDQILEFLVANNEFLAFTPNSSETRTMINLLSLRYPLLKLVARVYE
DELELETYIRSDLYGTCNQEKNCPNPKIRGAVVFHSQGPKLFDYSIRLNHTWAFSGFPDV
KSIMDVDGPYLNDLELGVNTVPIMQYGLSGFMTLQQVLDSFIIFAAQQTEISSVYEGPAV
PVLNSSNMLPLLKFPSMQFIPSNIRVVPFPTRDYTDDEFQLIIKKVMGILYLLGFLYPIS
RLISSFVFEKEQKIKDGLFMMGLKSNIFQISWLITYAVQFAVSSGIITVFTMCSLFEYSD
KSLVFVYFFLFGLSTITLSFLISTFFTRAKTAVAVGTLSFLGAFFPYYTVNDPDVSIVLK
AAASLLSPTAFALGTINFADYERAHVGLRWSNIWRESSGVNFLLCLSMMLFDALLYGAIG
IYLDKVLPKEDHEHFSWKLILPKFLQTKKDNIKPCTVGSVLKVEGTSMEMKQQEVEGRCL
QIRNLSKVYASRKGNCCAVNSLQLTLYENQIFALLGHNGAGKSTTISMLVGLTPPTSGDA
LVFGRNILTDMNGVRKDLGVCPQSDILFPELSVKEHLEMFGVLKGVEDDILESVVADMID
EVGLSDKVNTLVSCLSGGMKRKLSLGIALIGNSKVIILDEPTSGMDPYSMRLTWQLIKKV
KKGRIVLLTTHSMDEAEALGDRIAIMANGSLKCCGSSLFLKHQYGVGYTLTLVKTAPGAS
LAADIVHRHIPSATIVSEVGTEISFKLPLTSSSSFESMFKELESCMKRSTSNSEAAAGEN
ECAGIDSYGISVTTLEEVFLRVAGSDLDELESVDQKTTLHDSLVSQASEYHPPVKNSFVK
LCGSYKDFIVVMCVILVRTMRVFFAAVWCFFNFLCLQFCCPSVFSRSDFWQHSKALLKKR
AISARRDQKTIVFQLLIPAVFLLFGLLFLELKPHPDQQSLTFTTLNFNPLLHGGGGGAPL
PFDLSYPISEEIASRIDGGWIQEFKLSAYRFPDSEKALSDAIEAAGPNLGPQLLFMSEYL
ISSINESYQSRYGAVVMDKPNDDGSLGYTVLHNSTCQHAAPTYINLINSAILRLAVSDKN
RTIQTRNHPLPMTKSQHLQHHDLDAFSAAIIVTIAFSFIPASFAVPIVKEREVKAKHQQL
LSGVSILSYWVSTYVWDFVSFLLPSSFAVVLFYIFGLDQFVGTRGLCPTVIIFLEYGLAV
ASSTYCLTFFFSDHSVAQNVILLVHFFTGLVLMVISFVMGVMEPTATVNSYLKNIFRLSP
GFCFADGLASIALLRQGLKDKSSHGVLDWNVAGASICYLGFESIFYFLVTLGLEVLPPRK
LTPVTIDFCWRKLKTLCRASNNSVLEPLLASSSDTLALELDEDIDVKAERNRVHSGAADR
AIIYLRDLRKVYPGGEVQSPKVAVDSLTFAVHEGECFGFLGTNGAGKTTTLSMLSGEECP
SEGTAFIFGKDIRTNPKAARQNIGYCPQFDALLEYLTVREHLELYARIKKVPDNRIEEVV
MEKVVEFDLLKHVNKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWD
VISYLSTRRGRTAVILTTHSMNEAQALCTRMGIMVGGRLRCIGSPQHLKTRFGNHLELEV
KPTEVNSEQLEALSLMIQEKLAEVPSHRRSLLGDLETCIGAVDITLDKVSVAEISLSRDL
IVMIARWLGNEERVGALVHSSNASDGLLSEQLTDQLVRDGGIPLLVFTEWWLTKDKLSVI
ENFILSSFPDATFQGCNGLSAKYQLPFREDISLADAFGHIERNRTRVGIAEYSISQSTLE
TIFNHFAANS
NT seq
5613 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtcgaagcgccagttgaaggcgatgcttcgcaaaaactgtctccttaaaatt
cgacatccttacgttacttttgctgagatatttcttcctacaattgtgatgctgatgttg
atggctgttcgaactcaagttgacacgcgcgttcaccctgcccaaccgtatattcggaaa
gatatgctagtggaggttggtaaaggcgatgtatctaatccctttgaccaaattttggag
ttcttagtggcaaacaatgagtttttggcttttacacccaactcaagtgagacacgaaca
atgataaatttgctgtcattacggtaccccttgctgaagttggttgctagagtctacgag
gacgaattggagcttgaaacctacattcgctcagatctatatggtacctgcaatcaggag
aagaattgtccaaatcccaaaatcagaggggcagtggtatttcacagtcaagggcctaag
ctatttgattacagtatacgccttaaccatacatgggctttctccgggtttcctgatgtc
aagagcatcatggatgtagatggtccttatcttaatgacttggagctgggtgtgaacact
gttccaattatgcagtatggcttaagtggtttcatgactcttcaacaagttctcgattcc
ttcataatatttgctgcacagcaaactgagattagtagtgtctatgaaggtccggcagtt
cctgtgttgaactcctctaacatgttgcccctgctaaagtttccttcaatgcaattcatt
ccttcaaacataagggtggttccctttccgactcgtgattacactgatgatgagttccaa
ttgattataaagaaagttatgggaatactgtatctgctaggttttctgtatccaatttcc
cgcctgataagttcgtttgtctttgaaaaggagcaaaaaatcaaggatgggcttttcatg
atgggtcttaaaagtaatattttccagatctcatggttgataacatatgctgtacagttt
gcagtctcttccgggatcatcacagtattcaccatgtgctctctttttgagtacagtgat
aaatcactggtgtttgtgtacttctttctctttgggttgagcacaataacactttctttc
ttgatttccacatttttcacaagagctaaaacagctgtggcagttgggacactttcattt
ctgggagccttcttcccttattacactgttaacgacccagatgtatcaatagtattaaag
gctgctgcatcgttgctttctcccacagcctttgcattaggaacaattaattttgctgat
tacgagagggcacatgttggattgcgttggagcaatatatggcgtgaatcatctggggtt
aactttctactttgtttaagcatgatgctgtttgatgcactattatatggtgctattggt
atctacttggataaggttctcccgaaagaggatcatgaacatttttcatggaagcttata
ttgcctaagttcctccagacaaagaaagataatattaagccttgtactgttggctctgtg
ttgaaagtggagggtacaagcatggagatgaagcagcaagaagttgaaggcaggtgcctc
caaataaggaatcttagtaaagtatatgcctcgagaaaggggaattgctgtgcggttaat
tctttgcagctgactttgtacgaaaatcagattttcgcacttctaggacacaatggggct
ggtaagagcacaaccatctctatgctagttggacttactcctccaacttctggggatgct
ctggtttttggaaggaatattttgacagatatgaatggtgtccgcaaggacttgggagtg
tgccctcaaagtgatatccttttcccagaattaagtgtgaaagagcatttggagatgttt
ggcgtactaaaaggtgtggaggatgacattcttgagagtgttgttgctgacatgattgat
gaggttggtctctctgacaaagttaacactcttgtaagttgtttatctggcggtatgaaa
aggaaactttccttgggaattgcactaataggaaatagtaaggttataattcttgatgaa
cctaccagtggaatggatccctattcaatgcgcttgacatggcagctaataaaaaaggtt
aagaaaggaaggatagtattattgacgacacactcaatggatgaagctgaagcattagga
gatcgtatagctattatggcaaatggctctttgaaatgttgtggaagctccctcttcttg
aagcatcagtatggggttggttatacccttactctagtgaagactgcgccaggtgcctct
cttgctgcagatatagttcatcggcatattccgtcagccacgatagtgagtgaggtgggt
acagagatatcattcaagctccctttgacatcgtcatctagttttgagagtatgtttaaa
gaacttgaaagctgtatgaagaggtcaacatcgaattctgaagcagctgctggtgagaat
gagtgtgctggtattgatagttatggcatctctgtgacaactttggaagaggtatttttg
agagtggctgggtctgacctcgacgaattggagtctgtagatcagaaaacaactctccat
gattctctggtttctcaggcatctgaatatcatcctcctgttaaaaactcctttgtaaaa
ctttgtggaagctacaaggactttatagtggtcatgtgtgttatattggtgaggaccatg
agagtgttctttgctgcagtctggtgtttctttaactttctatgcttgcaattttgttgt
ccttccgtattttcaaggtcagacttttggcagcactcaaaggcattacttaaaaagaga
gcaatatcggctaggagagatcagaaaacaattgttttccagcttctaattccagcagtc
ttcctgctttttggactattgttcctagaactcaaaccgcaccctgaccagcaatctcta
acatttacaactttaaacttcaatcctttattgcatggtggtggtggtggtgctccactt
ccatttgatctatcttatcctatctcagaagagattgcatcacgcatagatggtggctgg
attcaagagttcaaattaagtgcatacagatttccagattcagaaaaggcactatcagat
gccatagaggctgctgggccaaatttgggaccacaactactttttatgagtgaatatctg
atttctagcataaatgaatcctatcagtcaagatatggggctgttgtaatggacaagcca
aatgatgatggaagcctggggtatactgtactgcacaacagtacttgccaacatgctgcg
ccaacgtatataaatttgattaattcagcaatcctcaggcttgctgtttctgataagaac
aggacaatccaaacacgtaatcatccactaccaatgacaaaaagccaacacctgcagcac
catgatttggatgcattctctgcagcaatcattgtcacaatagctttctcatttattcct
gcatcatttgctgttcctatagtaaaggagcgtgaagtgaaagctaaacatcagcagttg
ctgagtggggtatctatactatcatattgggtttctacctatgtgtgggacttcgtcagc
ttcctcttaccatcatcatttgcagttgttcttttctacatctttggtttggatcagttt
gtgggaactagaggtttatgtccaacagttattatctttctggagtatggactagcagtt
gcctcttcaacatattgcttaacattttttttctctgaccacagtgtggcgcagaatgtg
attctactggtccacttttttaccggacttgttcttatggtaatatcatttgtaatggga
gttatggaaccaactgcaacagtcaattcttatcttaagaacatattcagactatcacct
ggattctgctttgcagatggacttgcatcaattgcccttctacgccaagggctgaaagat
aaatccagccatggggttcttgactggaatgttgctggtgcctcaatctgctatctaggt
ttcgagagcatcttctatttccttgtaacgcttggacttgaagttctacctcctcgcaaa
ttaactcccgttacaatagatttttgctggagaaaattaaagactttgtgccgtgcgagc
aacaacagtgttttagagcctttattagcttcatcttctgatactttggctcttgaactt
gatgaggatatagatgtaaaagcagaaagaaacagggtgcattctggtgctgcagacagg
gcaattatatacttgcgtgacctacggaaggtctatccaggtggagaagttcaaagtcca
aaagttgccgttgattcgttaacattcgctgtccatgaaggagaatgttttggctttcta
ggaacaaatggagctggaaagacgaccacgttgtcaatgctatctggagaagaatgccct
tctgagggaaccgcttttatatttggaaaggatatacgcacaaatccaaaggctgcgcgt
cagaatatagggtactgcccccagtttgatgctttgttagaatatttgactgtgagggag
catcttgagctttatgcaaggatcaaaaaagtacctgacaatcggattgaagaggtggtt
atggagaaggtagttgaatttgacttgttgaagcatgtcaacaaaccatcttttaccctt
agtggggggaacaagcgcaagttgtccgtggcaattgcaatgattggagatcctcctata
gtcatacttgatgagccgtctacaggcatggatcctatagctaaacgttttatgtgggat
gtcatttcctacctgtccacaagacgagggagaacagcagttatactcactacacacagc
atgaatgaagcacaggcactgtgcaccaggatgggaataatggttgggggcaggctgcga
tgtatcggaagtccccagcatctgaagacacgatttgggaatcatcttgagctggaggtg
aaaccaacggaagtaaactctgagcaactggaagccctgtcgctgatgattcaagagaag
ctcgctgaagttccatctcaccggagaagcttactcggcgacctggagacatgcattggg
gctgttgatatcacactcgacaaagtgtctgtggctgaaattagcttgtcaagggacttg
attgtgatgatagctcgttggcttggcaatgaagaacgagtaggggctttagtacattca
agtaatgcatctgatggactactgagtgaacagctaacagatcaactggtccgtgatggt
ggcattccgttactggtgttcactgaatggtggttgacaaaggataagctttctgtaata
gagaatttcattctatcatcatttcctgatgctactttccaggggtgcaatggattaagt
gccaaataccagttaccatttcgggaagacatatcgttggctgatgctttcggtcacata
gaacgcaacagaactcgagttggcatagcagaatatagcatcagtcaatctactctggag
accatcttcaaccactttgctgccaactcatga
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integrated database retrieval system
