Beta vulgaris (sugar beet): 104889394
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Entry
104889394 CDS
T03548
Name
(RefSeq) DNA helicase INO80
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104889394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bvg03036
]
104889394
Chromosome and associated proteins [BR:
bvg03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
104889394
INO80 complex (yeast)
104889394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
AAA_25
P4Ha_N
Motif
Other DBs
NCBI-GeneID:
104889394
NCBI-ProteinID:
XP_010672903
LinkDB
All DBs
Position
3:complement(21440479..21453692)
Genome browser
AA seq
1549 aa
AA seq
DB search
MISPTSSVTSRVFNMDRNSQSLFANLFNLESLVNFRVPHPDDDSDYYGSSSQDESRGSQG
GVIGGHSNGIVTERDAKKRKRNRNSDDELENGYYKTPITEERYRSMLGEHLQKYKRRPKD
SSLSPAPARIPVPMPKSSATVPVAPKTRKFVNEPRGGLRELEKTPDYLNHSFPQNLGNHY
DADYALRYANDRMTQESVYLDIGEGIAYQIPPTYDKLAATLNLPSFSDIRVEEYYLKSTL
DLGSLASMMAADRRFGYRGIAGMGEALPQYDSLQAKLKSLTPSDQVQKFDLKVTEEGLYS
IPEGAAGRIQRSIMSSDGGQMHVHYVKVLEKGDTYEIIEKSLPKMQKAKKDPSAIEREEK
EKIGKVWINIARRDLPKHHRIFTNNHRKQLMEAKRFAETCQREVKMKISRSLRLMRAAPI
RSRRLTRDMVVYWKRWEKEMAEVKKKEEKEAAEALKRERELEEARRQKKRLDFLLSQTEL
YSHFMQNKPDARPSEALPGDENISSEEIEDVKEGEEDIEDAELKKEALKAAQDAVSKQKK
LTSAFDDECMKLRQSVDSEVLDEDASAPGSSNIDLLHPSTMPVTSTVQTPELFKGSLKEY
QLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEGKNIWGPFLVVAPASVLNN
WADEISRFCPDLKTLPYWGGLQERQVLRKNINPKRLYRRDAGFHILITSYQLLVTDEKYL
KRVRWQYMVLDEAQAIKSSSSIRWKTLLTFNCRNRLLLTGTPIQNNMAELWALLHFIMPT
LFDSHDQFNEWFSKGIESHAEHGGTLNEHQLNRLHAVLKPFMLRRVKKDVVTELTGKTEI
TVHCKLSSRQQAFYQAIKNKISLAELFDNSRGLNEKKILNLMNIVIQLRKVCNHPELFER
NEGSSYLYFGDIPNSLQPPPFGELEDVPYAGGRNSITYQIPKLVYEDVLRGSRTHCSAVR
RGLSRGSFEKYFNIFTPSSIYRSIINQESTTQAISVGSGTFAFTHLMDLSPAEVTFLANS
SFLERLMFSVMTQDRQYLDEIVNLMEVEDGDLQIERGKVRAVTRMLLTPSKSGCKFLRRK
LATGPKDSPYEALVVSHEDRLLSNITLLHSMYTYIPQSRAPPICAHCPDRNFYYQMLEEL
HNPWIKRLFVGFARTSDFSGPRRPDGPPNPLIQEIDSELPVLQPALQLTYRIFGSCPPMQ
SFDPSKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDG
SSTIMDRRDMVRDFQHRNDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDR
AHRLGQTKDVTVYRLICKETVEEKILQRASQKSTVQQLVMTGGHVQGDLLAPEDVVSLLI
DDAQLEQKLKEIPLQVKDKLKKKRVNKGIRIDAEGDASLEDLDKVANEAAEIEPSPDPEK
PKSNHKKRKTGDKSKQKAAKASNTEITDAGLMPGNEFDGYVNNPDQQQRPKRPKRERPTK
SVNENIEPAFTASPAVVPIQPQNLPFIDQSSGAFAPLSEENLVPHQSGL
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atgatttctcctacttcttcagttacctcgagagttttcaatatggaccgtaattcacag
tccttgttcgctaatctctttaaccttgagtctttggtgaactttcgagtgccgcatcca
gatgatgattctgattactatgggagtagcagtcaggatgaaagtagaggtagtcaaggg
ggagtgataggtggccatagtaatggaattgtgactgagagggatgcaaagaaaaggaag
aggaataggaacagtgatgatgagctagaaaatggttactacaagactcctattacggag
gagcgctatcgttccatgttaggtgagcacctccaaaagtataagaggaggcccaaagat
tcttctctgagcccagcacctgcacgaattcctgtccctatgccaaaaagtagtgcgact
gtgcccgtggctcccaaaactcggaaatttgttaatgagccccgaggtgggttacgtgag
ttggagaaaactccagactatttgaatcactcgtttcctcagaatttgggaaaccattat
gacgccgactatgcgcttagatacgccaatgacaggatgactcaggaatctgtatatttg
gatattggggagggtatagcttaccaaattcctccaacttatgacaagctggcagcaact
ctgaacttaccaagcttttcagatattagagtggaggagtattatttaaagagtaccttg
gatttgggttccttagcttcaatgatggcagctgacaggaggtttggttacagaggtatt
gctggcatgggggaggcactgccccaatatgactcacttcaagcaaaactgaagtctttg
actccgagtgaccaggttcagaagttcgatttgaaagtgacagaagaagggttgtactcg
atccctgagggggcagctggaaggatacaaaggtcaataatgtcatcagatggaggtcaa
atgcatgtccactacgtgaaggtgttggagaaaggagatacatatgagattatcgaaaag
agtctacccaaaatgcaaaaggcgaagaaggatccttctgctattgaaagggaggaaaag
gagaagattggaaaagtttggatcaatattgctcggagagatctaccgaagcatcatcga
attttcactaacaaccaccgcaaacagttgatggaagcgaaaagatttgcagaaacctgt
caaagagaagtaaaaatgaaaattagtagatcactcagattgatgagggctgctccaatt
agatcaaggagacttaccagagacatggtggtgtattggaaaagatgggaaaaggagatg
gcagaagtgaagaagaaggaagaaaaagaagccgcagaagctttgaagcgggaacgcgag
cttgaagaagcaagaagacagaagaaaaggctcgattttcttttgtcacaaacagaactg
tatagtcatttcatgcaaaataagccagatgcacgcccgtctgaggctttacctggcgat
gaaaatatcagtagtgaagaaattgaagacgtaaaggagggagaagaagatatagaggat
gctgaattaaagaaagaagctcttaaggctgctcaagatgctgtttctaagcagaaaaag
ctgactagtgcctttgatgatgaatgtatgaagttgcggcaatcagttgatagtgaagtt
ctagatgaagacgcgtcagcacctggatctagcaatattgatctacttcatccatcaact
atgccggttacttcaacagtacagacaccagaattatttaaaggttccttgaaagaatat
cagctgaaaggcctccaatggcttgttaattgctatgaacagggtctaaatggtatcctg
gctgatgagatgggattggggaagactatacaggccatggctttcttggctcatttggct
gagggtaaaaatatttggggcccctttctggttgttgccccagcttcagttttgaataac
tgggctgatgaaattagtagattttgccctgatctgaaaacgcttccatactggggtgga
cttcaagaacgacaggttcttaggaaaaatattaatccgaaacgactttatcgtagggat
gctggatttcatatacttatcacaagctaccaattattggttactgatgagaagtacttg
aagcgtgtcagatggcagtacatggtactagatgaggctcaggcaattaaaagctcaagc
agtataagatggaagactcttcttacttttaactgtcgaaatcgtttgcttctgacgggt
acgcctatccaaaataacatggcagagttatgggctcttctacatttcatcatgcccact
ctttttgacagccatgatcaatttaatgagtggttctctaaagggatagagagtcatgca
gagcatggaggtacattgaatgaacaccagctaaatagattgcatgcagtactgaaacct
tttatgttgcgccgggtcaagaaagatgtggtgactgagttgactggaaagacagagatt
actgtgcactgcaaattgagttcccgacaacaagctttctatcaagcaataaagaataag
atatcactggctgagttatttgataacagtcgtgggcttaatgaaaaaaagattcttaat
ttgatgaatattgtgatccagttgaggaaggtctgcaatcatccagagttgtttgaaagg
aatgagggtagctcatacctttacttcggagacatcccaaattctcttcagcctcctcct
tttggggaactggaggatgtaccttatgctggtggtcggaattctataacataccagata
cctaaattagtctatgaagatgttcttcggggttctcgcacacattgttctgctgtcagg
cgtggtctcagtagaggatcttttgagaaatacttcaatatatttactccaagctctata
tatcgatccataataaaccaagaaagtacaactcaagcaatatctgttggaagtggaaca
tttgcttttacccatctaatggacttgtcacctgcagaagtcacattcttggctaatagc
tctttcttggagagactgatgttttccgtgatgacacaagataggcagtacttggatgag
attgtaaacttgatggaggtcgaagatggtgatctgcaaattgaaagaggaaaagtaaga
gctgtcacaagaatgttgctaacaccaagtaaatcaggctgcaagtttctgagaagaaag
cttgcaactggtccaaaggattctccatatgaggcactggtggtttctcatgaggacaga
ctcttgtcaaacattacacttcttcattcaatgtatacttacatcccccaaagtagagca
ccaccgatctgcgctcactgtccggatagaaatttctattatcaaatgcttgaagagcta
cataacccctggatcaagagactttttgttgggtttgctcgcacttccgactttagtgga
cctagaaggccagatggaccccctaatcctttaattcaagagattgattctgagctacct
gttttacaaccagctcttcagctgacatacaggatatttggttcatgcccgccgatgcag
agttttgatccatcaaagttgcttactgattctgggaagctacagacacttgatatatta
ttgaaacgcttaagagccgagaatcatcgtgttctgctgtttgcacaaatgacgaaaatg
cttaatatacttgaggattatatgaattaccgaaaatacaagtatcttagacttgatgga
tcatcgaccatcatggaccgacgagacatggttcgagacttccaacataggaatgatata
tttgtattcctgctgagtacaagggcaggtggactgggtatcaatctaactgctgcggat
actgtgatattctatgaaagtgactggaatccaaccttggatttgcaggcaatggataga
gctcatcgcttgggtcagacaaaagatgttaccgtctaccgtttgatttgcaaagagaca
gtcgaagagaagattttacagagagcgagtcaaaaaagtaccgtacagcagcttgtaatg
actgggggccatgtacaaggtgacttgttggcgccagaagatgttgtctcattacttatt
gatgatgcccagttggagcagaaattgaaagaaattccattacaggtcaaagataaacta
aagaaaaagcgtgtgaacaaaggcatacgtatagatgcagaaggagatgcatctttggaa
gatcttgacaaggttgcaaatgaagctgccgagatagaaccctctcctgacccagagaag
ccgaagtctaaccataaaaagagaaaaactggtgataaatcgaagcaaaaggcggcaaaa
gcctccaacacagaaataactgatgctggcttaatgccgggaaatgagtttgatggctat
gttaacaacccggaccaacaacaaagacccaagaggccaaagagagaaagaccgactaag
agtgtgaatgagaacatcgaacctgcattcactgcttctcctgctgtggtcccaatacag
ccgcaaaacctacctttcattgatcagagttcaggagcttttgcgccattgtcagaggaa
aatcttgtccctcatcagagtggtctgtag
DBGET
integrated database retrieval system