Beta vulgaris (sugar beet): 104889418
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Entry
104889418 CDS
T03548
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104889418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bvg03041
]
104889418
Spliceosome [BR:
bvg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
104889418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_Gbeta
EIF3I
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
PRP4
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_SCAP
eIF2A
Beta-prop_WDR75_2nd
WD40_like
Beta-prop_SPT8
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
104889418
NCBI-ProteinID:
XP_010672936
LinkDB
All DBs
Position
3:21786206..21791510
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AA seq
599 aa
AA seq
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MEVDEENPCSASGSAAESTPAVADTEMLDTVGIPAPATAIESHSLATVIPPAAPPLVIPP
SVPPPTVAPLSAPPPVLVPSMAPLPAVPSTLPRSLAPLPVRPPVLKPPVAQNGEVNASES
DSDHDDHGIHGSTAEYEITEESRQVRERQEKAMRDLLMKRRAAALAVPTNDMAVRTRLRR
LGEPITFFGEREMERRDRLRMLMAKLDAEGQLDMLMKAHEEEEEAASARDEVDEQIIQYP
FYTEGTQELLEARKFIAKFSIVKASQRLQSARRKRDDPDEDEDAEIDWALRQAKTFALAS
SEYGDDRPLWGCSFSRDGNLLATCSSNGVAKIWSMPQVTRVATLRGHTEHVTDIAFSPVS
DYVATSSVDRTARLWNSDGTLLRKFEGHLKRLARIAFHPSGKYLGTASFDKTWRLWDIET
GAELLLQEGHSRDVYGISFHPDGSLAASCGLDSLARVWDLRTGRSVLALEGHVNPVFGVD
FSPNGYHLATGSEDNTCRIWDLRKKKSFYVIPAHSKQLSRVKFEPQDGYYLVTASYDTTA
KVWSSRDFKPIKTLSGHESRVASLDITGDGQCIATVAHDRTIKLWSSSVPSEDKSMDVD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggaggtagatgaggagaatccctgttctgcttctggttcagcagcagaatcgactcct
gcggtggctgatactgagatgctggatactgtgggtattccagcgccagctactgcaatc
gagagtcattcattggcgactgtaattccacctgcagcaccgccgttagtcattcctcca
tcagttcctcctcccacagttgcccctttgtcagctccacctcctgttcttgttccttca
atggctcctctacctgctgtaccttctacacttcctagatcattagcacctcttcctgtc
cgcccgcctgtgcttaaaccacctgttgcacagaatggtgaggttaatgcaagtgaatcg
gactctgaccatgatgaccatggtattcatggttcaactgctgagtatgaaattacagag
gaaagtcgacaggtaagggaacgtcaagagaaagcaatgcgggatctcttgatgaagcgg
cgagctgctgctttagctgtacccactaatgatatggctgtgcgcactcggcttcgccgt
cttggtgagcctatcactttctttggggaaagagagatggaaagacgggataggctccgg
atgctgatggccaagcttgatgctgagggacagttggacatgttgatgaaagcgcatgag
gaagaggaggaagctgcttcagctagggatgaagttgatgaacaaatcattcagtatcca
ttttatactgaagggacacaggaattgttggaggctcgaaagtttattgccaagttttcc
attgtcaaagcatctcaacgtctgcagagtgccaggaggaaaagggatgatccagatgaa
gacgaggatgcagagatagattgggctcttagacaggcaaaaacatttgctcttgcttcc
agtgaatatggtgatgaccgtccactttggggatgttcgttctcaagagatggaaatctg
cttgctacctgttcatcaaatggagttgccaaaatatggagtatgcctcaggtgacgagg
gtcgctaccttaaggggacatactgagcatgttactgatattgcattttctcctgtaagt
gactacgtggcaacttcctcagttgatcgtactgcaaggttgtggaactcagacggtact
ctattaagaaaatttgagggtcatctaaaacgcctagctcgtattgctttccatccatca
gggaagtacttgggcactgcaagttttgataaaacttggcgcctgtgggacattgaaact
ggtgcagagttgcttcttcaggaaggccatagcagagacgtttatggcatatctttccat
cccgatggatcattggcagcatcttgtggactggattctcttgcacgtgtctgggatctc
cgaacaggaagaagtgttcttgctttggaagggcacgtcaaccctgtttttggagttgat
ttctcccctaatggctatcatttggcaaccggttccgaggataatacttgccggatttgg
gacttgagaaagaaaaaatctttttacgttattccagcccattcaaaacagctttcacgg
gttaaatttgaacctcaagacggatattatttggttactgcctcttatgatacaactgct
aaggtatggtcatctcgagacttcaagcctatcaagacgttgtcagggcatgaatcaaga
gttgcatccttagatattacaggagatggacaatgcattgcaaccgttgcgcatgatagg
acgatcaaactatggtcaagcagtgtcccttcagaagataagtcaatggacgtagactag
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