Beta vulgaris (sugar beet): 104889520
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Entry
104889520 CDS
T03548
Name
(RefSeq) nuclear poly(A) polymerase 1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104889520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvg03019
]
104889520
Enzymes [BR:
bvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
104889520
Messenger RNA biogenesis [BR:
bvg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
104889520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
104889520
NCBI-ProteinID:
XP_010673060
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All DBs
Position
3:complement(23490328..23499486)
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AA seq
734 aa
AA seq
DB search
MAGSGANFRYHGQRLGITEPISCGGPTEYDVTKSHELEKYLEDVGLYESQGEAVSREEVL
GRLDQIVKLWVKTISRAKGLNEQLVQDANAKIFTFGSYRLGVHGPGADIDTLCVGPRHAT
REEDFFGELHRMLSEMPEVTELHPVPDAYVPVMKFKFSGVSIDLLYAKSSLWVIPEDLDI
SQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQHFRTTLRCMKFWAKRRGVYSNVAGFL
GGINWAILVARICQLYPNSLPNMLVSRFFRVYTQWRWPNPVMLCEIEEGSFGLQVWDPRK
NPKDRYHLMPIITPAYPSMNSSYNVSSSTLRIMTEEFQRGHDLCEAMESNKAEWDTLFEP
YPFFEAYRNYLQIDINAENADDYRKWKGWVESRLRTLTLKIERHTYNMLQCHPHPGEFTD
NCKPFHSCYFMGLQRKKEVPAGEGEQFDIRMTVDEFKQTVNMYTLWKPGMEIRVSHVKRK
SIPSFVFPGGIRPSRPTKSSGGSKRSSEIKSDVDKLDDGRKRKKENDMMTSAAIPRNSAS
LPSSSGGGHTGSPISTATSSVKVEHLELDGYSERKAEIVDTEMLCTRNNGELNGTEHQSI
PLRNSSAPAVLSDSKETEKLAIEKMMLGPYGSHQVLPELDELENDPENGNQVEHSGGAVK
LLEEPSPMKASPEIGNLGTTAAHFSSFSNGSLEELEPAELTMPAPVQIIPAPVQNKPLIR
LSFTSLGKATSHSS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggctggttctggagccaactttcgatatcatgggcaacgattaggcataactgagccg
atctcatgcggtggacccacggagtatgatgtaactaaaagccatgaacttgaaaagtat
ttggaagatgttggtttgtatgagagtcagggggaagctgtcagtagggaggaagtgcta
gggagactagaccagattgtgaagctctgggtgaaaacaattagccgagccaaggggttg
aatgagcaattagtgcaagatgcaaatgcaaaaatcttcacttttggatcgtaccgcctt
ggggtgcatggtcctggagctgatatagatacgctatgcgttgggcctagacatgctaca
cgagaggaagatttctttggagaacttcacaggatgctgtctgagatgccagaagttaca
gagttgcatcctgtgcctgatgcttatgtccctgtgatgaaattcaagtttagtggggtg
tccatagatcttctttatgcaaaatcatcactttgggtgattcctgaagatttggatatc
tcccaagattcaattttgcaaaatgcagatgaacagactgttcgcagtcttaatggttgt
agagttacagatcaaattttgcgcttggtgccaaatatacagcatttccggacaactctt
agatgcatgaaattttgggcaaaacgccgtggtgtgtattcaaatgttgctgggtttctt
ggtggtattaattgggcaatactagttgctcgcatttgtcagttgtatccaaactcactg
cccaatatgttagtatctcgcttctttagggtttatactcaatggaggtggcccaatcct
gtcatgctctgtgaaattgaagagggatcttttggtctgcaagtttgggatccgaggaag
aatccgaaggatagatatcacctgatgcctataataactcctgcatatccaagtatgaac
tctagttataatgtctcatccagtactctgcggattatgacagaagagttccagagggga
catgacctctgtgaggctatggaatctaacaaggctgaatgggatactctttttgagccc
tatcctttcttcgaagcatatagaaactatctgcagatagacatcaacgctgaaaatgct
gatgactatcgtaaatggaagggttgggtggagtcccgtctccgtacacttacattaaag
attgagaggcacacatataatatgcttcagtgccatcctcacccaggagaattcacagat
aactgcaaaccatttcacagctgttatttcatgggtttgcaacgtaaaaaggaagtccca
gctggtgaaggcgaacagtttgatataaggatgactgttgatgaatttaagcaaactgtt
aatatgtatactttatggaaacctggaatggagatccgcgtaagccatgttaaacggaaa
agtataccgtcttttgtatttcctgggggtattagaccttcccgtcctactaaatcatct
ggtggaagtaagcgatcttctgagataaagtctgatgtagataagctagatgatgggcgg
aagaggaaaaaggaaaacgatatgatgactagtgcggcaattcccaggaactcagcttcc
ttgccttcttcaagtgggggaggccacacaggtagtcctatcagcacggcaacttcttca
gtaaaggtagaacatctagaattggatgggtatagtgagcgaaaggctgagattgttgat
acagaaatgttatgtactagaaataatggtgaactcaatggaactgagcaccaaagtatt
cctctcaggaattcatcagctcctgctgttttatctgattccaaggagacagagaagttg
gcaattgagaaaatgatgttaggtccatatggttcgcaccaagttttacctgagcttgat
gagctagagaatgacccggaaaatggaaatcaagttgaacattccggaggagctgtcaag
ctgttggaggagccttctcctatgaaggcatcaccagaaattggaaatcttggtacaact
gcagcccacttcagttcattttctaatgggagtttggaggagcttgagcctgctgaacta
acaatgccagcacctgttcaaataattccggctcctgtacaaaataagccgcttattagg
ctcagctttacatccttgggtaaagctacaagccacagctcgtga
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