Beta vulgaris (sugar beet): 104889562
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Entry
104889562 CDS
T03548
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvg03021
]
104889562
03036 Chromosome and associated proteins [BR:
bvg03036
]
104889562
Transcription machinery [BR:
bvg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
104889562
Chromosome and associated proteins [BR:
bvg03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
104889562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
Spt6_S1
HTH_44
HHH_9
Tex_central_region
HHH_3
SH2
S1
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
104889562
NCBI-ProteinID:
XP_010673120
LinkDB
All DBs
Position
3:24129088..24139554
Genome browser
AA seq
1661 aa
AA seq
DB search
MGGRAVVSDDEEELEPQDDEREQEEEGEELDDGEGGGGVDDDEDEDDEEGQDEFEDDGFI
VEGDEEDEEPEEDRDDDEEKHKKKKRKKRESFELDDDDYELLLDNNVKVARKSESKKLKR
LKKARRDTDAGRSGLSDEDEFIGSGGGRTAEEQVEHTLFGDDGEPVEDMPEEDEQIEPED
PDLADEDDMADFIVSESEDEVDGDGVRVRRVKAKKKKHRQAPGVPSSALQEAQDIFGDVD
ELLNIRRIALERDKYDDNGDWKDRGLEHEFEPSVLSERYMTDKDDRIREIDIPERMQISE
ESTGPPPTDADLIEDEAKWIKTQLESGQVPGLVKIALGEEMEDHIRSFLNFTHVQKLDLP
YIAMYRKEDIFCLLKDPETGEDVSHDKPALRWHKVLWAVQDLDKKWLLLQKRKSALQGYY
NKRFEEESRRIYDETRLRLNQQLFESIIGALRLAESEREVDDVDSKFNLHFPPGEAGVDE
GTFRRPKRKSQYSICNKAGLWEVASKFGYSSEQFGALISLERVDELEDPKETPEDVASNF
TCVMFDSPQDVLKGARHMAAVEISCEPRVKKHFRSKYFDNAVVSTCPTSDGNVVIDAFHQ
FAGVKWLRNKPLNRFEDAQWLLIQKAEEEKLLQVTIKLPEENLKKLINDSEEQYLSCGVS
KLAQLWNEQRKLIFQDAIFHFVLPALEKEARMLLNSRAKNRLLMDYGERLWDKVSVAPYQ
RKEIDISSEDEAAPRVMACCWGHGKPPTTFVMLDSYGEIVDVLEAGSISLRSQNVTDQQR
KKHDQQLLLKFMTEHQPQVVVLGAVSLSCTRLKDDIYEIVFKMVEENPRDVGHEMDGLSV
FYGDESLPRLYENSRISSDQISGHSGVVRRAVALGRYLQNPLAMVANLCGPGREVLDWKL
NPLENFLNADEKYGMVEQIMVDVTNQVGIDLNLAANHDWLFAPLQFISGLGPRKAASLQR
SLGRAGAIVSRKDLLTAHGLGRKVFISAAGFLRIRRSGLAVSTSQFVDVLDDTRIHPESY
ALAQEMAKDIYREIVGDDNLDDDDAIEMAIENLRDRPSALKSFSVDAYANDTGRLSKVET
LHAIKLELIQGFQDWRKLYEEPNQDEEFYMISGETDATLGEGQTVQATVRRVQPQKAICG
LESGLTGILMREDFSDDWRDSDLTEKLHEGEIVTCKIKSIQKNRYQVFLACRENDMRNMG
NQNVENMDPYYHEDRSSLPSEQEKARRDKELAKKHFKPRMIVHPRFQNITADDAMELLKD
KDPGESVIRPSSRGPSYLTLTLKVYDGVFAHKDIIEGGKDHKDITSLLRIGKTLKIGEDT
FEDLDEVMDRYVDPLVTHLKAMLNYRKFRQGAKAEVDELLRNEKNDTPLRIVYSFGISHE
HPGTFILTYIRSSNPHHEYIGLYPKGFKFRKRMFDNIDRLVAYFQRHINDPIHESPSIRS
VAAMVPMRSPATGGSSGGGGWSGSGGNDGGWRGSSDRDHSTSRGERNDYRNGGRDGHPSG
APRPYEGGGRGRGRGRGRGGRGSHHGNRDGGSRDGGDSSYGSKWSSDNRDSGGSKWGSDN
DKEGNNGSWSSFPGAKVQNAPGEEAFPGGWGSSGGAGSSSGGWGDNGSGGGGGGGSSSAG
GGWGGSGGDAGKDSGWASGSKSNSKGWSDSGGGGGGGGSGW
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atgggtggaagagctgtagtatcagacgatgaagaggagcttgagcctcaggatgatgag
agagaacaagaggaagaaggcgaggaactcgacgatggagaaggtggcggtggtgttgat
gatgatgaagacgaagatgatgaggaaggacaagatgagtttgaggatgatggttttatt
gttgagggtgatgaagaagatgaagaaccagaagaagatagggatgatgatgaggagaag
cataagaagaagaagagaaagaagagggagtcctttgaacttgacgacgatgactatgag
cttctcctagacaataatgttaaggttgctcgaaaatctgaaagtaaaaagttgaagagg
ttgaagaaggctcggcgtgatactgatgccgggcgttctggcctttctgatgaggatgag
ttcattggatctgggggtggaaggacagcagaggagcaggtcgaacacaccttatttggt
gatgatggagaaccggttgaggatatgccagaagaggatgagcagatagagccagaagat
cctgatttggctgatgaagatgacatggctgattttattgtatcagaatcagaagatgaa
gttgatggtgatggggttcgtgttagacgagtgaaggcaaagaaaaaaaagcacagacag
gctcctggagttccatcatctgcactgcaggaagcccaggatatatttggtgacgttgat
gaacttttgaatatacggcgaatagcactcgaaagagacaagtatgatgacaatggcgat
tggaaggatagggggcttgaacatgagtttgaacctagtgttctttctgagaggtatatg
actgacaaggatgatcgtatccgggagatcgacataccagaaagaatgcagatatctgag
gagagcactggtcctcctccaacagacgctgacctcattgaagatgaggccaagtggata
aaaacacagcttgaatctggtcaagttcctgggcttgtcaagatagcactgggagaagag
atggaggatcatattagaagttttctgaacttcacacatgttcagaaacttgatctccct
tatattgctatgtatcgcaaagaggacatcttctgtttgttgaaggatcctgagactggt
gaagatgtcagtcatgataaacctgctttgagatggcacaaggtgctctgggctgtccag
gacttggataaaaaatggttgcttcttcaaaagcggaagagtgctctccagggatactac
aataaaagatttgaggaagaatctcgcagaatatatgatgagacgagactacgtttgaat
caacaactttttgaatcgattataggggccttgagacttgcagaatctgaaagggaagtg
gatgacgttgactcaaaatttaatctgcatttccctcctggtgaggctggggtggatgag
ggcacatttagaaggcccaagcggaaatcacagtatagcatttgcaataaagctggttta
tgggaggttgccagcaaatttggctatagttccgagcagtttggtgcactgatatcttta
gagagagtggatgaactggaggatccaaaggagacaccagaggatgttgcctcaaatttc
acctgtgtgatgtttgattcgcctcaagatgtgctaaaaggtgctaggcacatggcagca
gttgagataagttgcgagcctcgtgtgaaaaagcattttcggagtaaatattttgataat
gccgttgtgtcaacatgtcctacttccgatggtaatgtcgtcatcgatgctttccatcag
ttcgcgggcgttaagtggttacggaataagccattgaacagatttgaggatgcacaatgg
ctgcttatccagaaggctgaagaggagaagctcctccaggtcacaattaagttgccagaa
gaaaaccttaagaagctgataaatgattctgaggagcagtatcttagctgcggtgtgagc
aagttagcacagctctggaatgagcagagaaaactgatatttcaggatgctatttttcat
tttgtactgccagcactagagaaggaagctagaatgctgttgaatagcagagctaagaac
aggttgcttatggattatggtgaacgtctttgggataaagtttctgtggctccataccag
cgcaaggaaatcgatatcagctcagaggatgaggcagctcctagggttatggcttgctgt
tggggtcatggaaagccaccaactacttttgttatgttggattcatacggggagattgtt
gatgtcctagaggctgggtcaatcagcttgaggtctcaaaatgttactgaccagcagcgt
aaaaagcatgatcagcagttgcttttgaagttcatgaccgaacatcaaccacaggtggta
gtcctgggggctgtgagtttgtcttgcacccgtctgaaggatgatatttatgagattgtg
ttcaaaatggttgaagaaaatcctagagatgtgggtcatgagatggatggcctgagtgtt
ttctatggggatgaatctttacctcgtctatatgaaaattctcgcatatcatccgaccag
atttctgggcattcaggtgttgtgagacgggctgttgccctgggacggtatcttcaaaat
ccattagctatggttgctaatctttgtgggccaggccgagaagttttagattggaaactc
aatcccttagagaactttcttaatgctgacgaaaagtatgggatggtggaacagattatg
gttgatgtcaccaaccaggtggggatagatctcaatctagctgcgaatcatgattggtta
tttgctccgttgcagtttatttctggtcttgggcccaggaaagcagcttccttgcagagg
tcacttggcagagctggggcaattgtttcgagaaaagatttgttgactgcacatggactt
gggagaaaggtatttattagtgctgctggctttctgcgtattaggcgtagtggtttagct
gttagtactagccagtttgttgatgtcttggatgatacgcgaatacatccagagtcctat
gctctagcacaggaaatggcgaaagatatttatagagaaattgttggggacgataatttg
gatgatgatgatgcaattgagatggcaattgaaaaccttagagacagaccaagtgccttg
aaatcttttagtgttgatgcatatgcaaatgatactggccgtttatctaaggtagagaca
ttgcatgccataaagctggagttaattcagggctttcaagattggcgtaaattatatgaa
gaacctaatcaagatgaagagttttatatgatttctggggagactgatgctaccctgggt
gaaggacagactgttcaagctacagttcgcagggtacaacctcaaaaagcaatatgtggc
ttggaatcagggctgactggtatccttatgagggaagatttttcagatgattggagggat
tctgatttgactgagaagctgcacgaaggtgaaattgttacttgtaagatcaaatctatc
caaaagaacagataccaggtgttcctggcttgtagagaaaatgacatgagaaatatgggg
aatcagaatgtagagaacatggacccttactatcatgaagatcgcagcagcttaccgagc
gagcaagaaaaggctcgcagagacaaagagcttgcaaaaaagcatttcaaaccgaggatg
attgttcatccccgttttcagaacattacagctgatgatgcgatggagcttttaaaagac
aaggatcctggtgaaagtgttattcgtccaagttctcgtgggccttcttatttgacgctg
accttaaaggtttatgacggtgtttttgctcacaaggatataattgaaggtggaaaggac
cacaaagacatcacaagcttgcttcgtattgggaaaactctaaaaattggggaggacact
tttgaggatttggatgaggtcatggaccgctatgttgatccattggttactcatttgaag
gcgatgcttaactatcgtaaatttcggcagggggcaaaagctgaagttgacgagctcctt
agaaatgagaaaaatgatacccctttaagaatagtttatagttttggcatttctcatgag
caccctggaacatttatcctgacatatatacgtagttcgaatccccatcacgagtatatt
ggtttatacccaaagggatttaaattccgcaaaagaatgtttgataacattgacaggctt
gtagcatactttcagaggcacatcaatgatcccatacatgagtcaccatcgatacgatca
gtggctgctatggttccgatgcgtagtccagcaactggtggctcctctggaggaggtgga
tggagtggatcaggcggcaatgatggtggatggcgagggtcttctgacagagatcattct
acatccaggggagaacggaatgattacagaaatggtggtcgtgatggacatcctagtggg
gcaccaaggccatatgaaggagggggccggggccgtggacgcgggcgtgggcgtggtggt
cgaggttcacatcatggtaacagagatggtggcagcagggatggcggtgattccagctat
gggtcaaagtggagctcggataaccgagacagcggtggctccaagtggggctctgacaat
gataaagaaggaaacaatggtagttggagtagcttccctggtgctaaagttcaaaatgct
cctggtgaggaagcatttcctggaggctggggttcaagtggtggtgctggtagtagcagt
ggaggttggggtgacaatggaagtggtggtggtggaggtggtggtagcagtagtgccgga
ggtggctggggtggaagtggtggagatgctggcaaagattctggatgggcttcagggagc
aagagcaactctaagggatggtctgacagcggaggtggcgggggtggcgggggaagtggt
tggtag
DBGET
integrated database retrieval system
