Beta vulgaris (sugar beet): 104889789
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Entry
104889789 CDS
T03548
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bvg03009
]
104889789
Ribosome biogenesis [BR:
bvg03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104889789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
DCB
HEAT_RRP12_N
Motif
Other DBs
NCBI-GeneID:
104889789
NCBI-ProteinID:
XP_010673398
UniProt:
A0A0J8CM50
LinkDB
All DBs
Position
3:complement(26161226..26187831)
Genome browser
AA seq
2688 aa
AA seq
DB search
MATSKEAQAVKYLNTTPGHRNRRFVFKSFAQRIDELEIDVFRNLDTVKAEPSSGSSFFLD
CLIQWRELNTAEDFISFYEEIMPFVQTLPLILLHKDIIVSGLLSRLQLKSRLSLEAILRL
IAELSRDLLEDFLPFLPKIVDSYLALLRDGADKQPEIIEQIFTSWSYIMMYLQKYLTRDV
VHVLKVTIKLRFYPKDFVQEFMAEALSFLMRNAPTQQLVKGVRKILCEAARKPSPTKNFG
VSALLWHIMRGTSSKFHSRAGRVLRLLINDRNLSIGDRFNQGSETVTEVVIIALERCMEL
NPNELVLMWDCLYEEINDCVSGGYSQHLSRLLSVLISTISVDRGRKVSDYQPILELVELL
IGEFILPDISGGAEGLVSEAVDKILQLMLCVLDGIFSTDNMTVIPRIASQWAPVFQLRSL
SLLTFLKELVLKDYAILAFRSNILSGWLNVLNLSKGEALLLMLEFCERFQVKTGGFSVVE
GMPEELVLKARCFFQEAVCNWFGVLKSMRDGDMTINQVDEGNLALLWGTICCFPYFLSAE
GDGFLMDLVDVINQLLTTEADVIGGVPKPIWQGLVGAALHSYRNAGRTERFEIEDISRIL
HFGKSCKSSWKVLSAVADYLDSSYGSSLQSNNNVEITHPKLKAAELLDALNAYSENLYDP
NKELRVSTLRVLCHYELLNHESLRSKQVADRQMDMEVSDVNHAGTQCGNVFKLLLSIEQT
PISIATSRKLTLLVSRIRTCLAAPGTPEVYVLPALYGSIGLLYNQFMDLSNSTVECLSAM
IITYPGLLWDRFIEIFERCQTSFLKAHGLDNSNVESFSERTDLVERFRSFCGTAYCDSSR
SSILSLLLQALEKIPTFIEAHSRQIVPLFLRFLGYSEESPCLESFDSQVCGVKDWKLVLM
EWLNLLKLMKNSRSFYKSQLLKEVLINRLLDNNDADIQIKVLDCLLNWKDEFLLPYEKHL
KNLVNSKYLREELATWSLSEESNLVEEEHRAQIVPLVIRLLLPKVRSLKTLASRKHASVS
NRKAVLGFIAELNVSELPLFFQLLMKSLQISEPSNYGMESCTGISKKNNMDEFELSSLLD
LFTTERILAIPWKKRYGFLHVVEEVLRIFDASRVSPFLDLLLGCVVRVLKSCASSIPSRS
NKQAAQLDNSSDVTLPEDGNEAVNHTSLDVKQFKEMRSLCLKIISFVLNKYEGYDFGSTF
WEIFFEAVKPLVHGFKQEGSSSEKPSSLFFCFIAMSQSPILVSLLCREKNLIPDIFSILS
VPTASEAIIYSVLKFIENLLTLEVELGIDRYAIEEVILLNLEGLVDSLHTLLYNFTEKKR
KLLKHPGETVLGVLKFLSKFVKDQATARKFVDILLLLASDGIKNSDVCMGALQILRDIVP
ALQSETNTKILKAITPILISAQRDVRLSICDLLDALAEKDSSIRSMAKLVCELNSTSAME
MGEPDFDIIINAYDRITADFFVGVREDQALVILSHCIYDIKSEELILRQSAYKSLLTFVE
FSALIIGEGLMKQEGDDGYWTDVHIQNIVNKFLLKHMGDAMTKGTTMRKEWIDLLHEMVL
KLSGIQNLGTLKVLCSEDAEVDFFNNIVHLQKHRRARALSRFRNIAATGKLSEFMLKKVF
IPLFFSMLYDLQMGKGEHLKTAYLDALASISGQLGWKSYYNMLMRCFRDMEKRHDREKIL
LRLVCSILDQFHFSKNVSSQDLGLLANDATENDLKPISVMLSNVSSPAFSVIQACLTSMV
LPKLQKLLLSDPEKVNVIISVAILKVLKLLPGNTLDTHLSSIIHRISNFLKNRLQSIRDE
ARCALVACLKELGFEYLQFVVKVLRATLKRGFELHVLGYTVNFILSKGLTDSMVGRLDYC
LGELLSVADNDIFGEVSEQKEVEKVAFKMKETRKQMSFDSLKLIAENVTFKTHGLKLLSP
VTAHMKKHLTPKVKLKLETMLTHIADGIEKNSSVDQTDLFIFIYSLIDDWLSDENRKSET
LLVEGSVIEKPYEAGSKTAMRCFVGTEPQCSYLIAVFALRLFHNRMKNLKFDKSNDQLLS
MLDPFIKPLTICLRSKFEEIIAAALKCLYPMIRLPSPSLESQADKIKVTLLDIAQSSSNV
NTPVMESCLKLLTALLQSSKITLSTDQLHVLIQFPLFVDLEKNPSFLALTLLKAIVRRKL
VVHEIYDVVTQVAELMVTSQEEAMRKRCSQILLQFLLNYQLSQKRRQQHLDFLVAHLRYE
HATGRVAVLEMLKTIIKRFPESIIFEQSKTFFLHLVHALANDADNQVRSLIGIVIKHLIG
RISSQPLEPILNICLAWYLGEKQQLRGPAAQVLGFVVEVMKRGFLKHINDVLPRMKMIVQ
STNDVLNVDQLNLPDHETIPFWKDAYYSFVLLEKILTQIPDLFFARDIEDIWLAVSEFLV
HPHPWICNISNRLMALYFEQMVKQGKKIGTTCLTSTSRMFLIASSLCCQLKIQLPDKGVR
RLVKCNIAFAICGIQSLLRQTEFNDPGTFWPSLDPREQGCFLKACQLLDPKSGKSITALF
TCGFDDENLGQKNNDISYLLVSGLLNTMGRAALQTEDAQTKMILGSIKLIADQTSQEDCQ
QYAYLLLFPIYKLCEGFAGKVVSDDVKQRAEKVRQKLQDKLGTQNFVQAYNQMRHDLGEK
RFKRKREEKVMAVVNPVRNAKRKMRVSAKHQAHKKRKMMAMKMSRWMR
NT seq
8067 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatcgaaggaagctcaagcggtgaagtatctcaacactactcctggacaccgc
aaccgccgctttgtgtttaaatcatttgcacaaagaattgatgagctcgaaatcgatgtc
tttcgaaatctcgatactgtcaaggctgagccctcttctgggtcctcttttttcttggat
tgtttgatacaatggagggagttaaatacagctgaggattttatttcattctatgaagaa
attatgccatttgtacagactttgcctttgattctattacacaaggatattatagtctca
ggactgctctctaggttacagttgaaatcgcggctttctctagaggctattctcaggttg
attgcagagttatcaagagatctacttgaagattttttaccctttcttccaaagatcgtt
gactcttacctggctcttctgagagatggtgctgacaagcaaccggaaattattgagcag
atattcacttcgtggtcatatataatgatgtatctacagaagtatctcacacgagatgtt
gttcacgttctcaaggtaacaatcaagctaagattttatcccaaagattttgtccaggag
tttatggctgaagcactgtcatttttgatgagaaatgcacctactcaacagcttgtaaaa
ggtgttcggaagattctatgtgaagctgcaagaaaaccatcgccgactaaaaactttgga
gttagtgctttgctgtggcatattatgagaggaacatcgtccaagtttcattcacgagca
ggtcgggtgctgcgcttattaataaatgaccgcaacttaagtataggtgacagatttaac
caaggatctgagactgttactgaagttgtgataattgctctggaaagatgtatggagtta
aatcccaatgagctggtgctgatgtgggactgcttgtatgaggaaataaatgattgtgta
tctggcggatattcacaacatttatctcgtcttttatcggtgctcatatcaactatttct
gttgatcgtggtcgaaaagttagtgattaccagccaatactggaattagtcgagttgctc
ataggagaatttatattgcccgatattagtggtggagcagaggggttggtatctgaagct
gttgataagatccttcagctcatgctgtgcgttctcgatggaatattcagtaccgacaat
atgactgttatccctagaattgcctcgcagtgggctcctgtctttcaattaaggagctta
agtttgcttacatttttgaaagagttggtcttgaaggactatgctatacttgcattccga
agtaatattctgagtggttggctgaatgtgctgaatttatcaaagggagaagctctactt
ctgatgctggaattttgtgaaaggtttcaagttaaaacaggaggttttagtgtagtagaa
ggaatgccggaagagctggttttaaaggctcgttgtttctttcaggaagcagtttgcaac
tggtttggagtgttaaagagtatgagagatggggatatgaccattaatcaagtagatgag
ggcaatttggctttactttggggaaccatctgttgcttcccttatttcttatctgctgag
ggggatgggtttttgatggacttggtggatgtaatcaatcaactattgacaactgaagca
gatgttattggtggagttccgaaaccaatttggcagggccttgttggtgctgctttacac
agttatcggaatgcaggaagaactgaaagatttgaaattgaagatatcagcaggattttg
cattttggaaaaagttgcaagtcatcttggaaagttctgtcagccgtggcagattatttg
gattcaagttatggatccagcctgcaaagtaacaacaatgttgagataacacatccaaag
cttaaagcagcagaactgttggatgctttgaatgcatattcagagaatttgtacgatccg
aataaggaacttcgtgtgtcaaccctccgagtattgtgtcattatgaacttctgaatcac
gaatcattgagatcaaagcaggttgctgaccgacagatggatatggaagtttctgatgta
aatcacgctggcacacaatgtggcaatgtgtttaaactgcttctctcaattgagcaaaca
cctatctcaatcgccactagtagaaagctgactttgctagtatctagaatacggacatgt
ctagctgctccagggacacctgaagtctatgtattgcctgcattatacggcagtattggg
ctcttatacaaccaatttatggatttatcaaattcaactgtagagtgcctttctgctatg
atcatcacatatcctgggctcctatgggataggttcatcgaaatttttgagcgttgccag
accagcttcttgaaagctcatgggttagacaactcaaatgtggaatcatttagtgagaga
actgatttggtggaacggtttcgctcgttttgtggcacagcatactgtgacagttcccgc
tcatcaatattgtctctgctactccaggctttagagaagattccaacatttatcgaggct
cattctcggcaaattgttccattatttttgagatttttgggttacagtgaagaaagccct
tgtttggagtcttttgattcacaggtttgtggagtgaaggattggaaacttgtactcatg
gagtggcttaatctattaaaattgatgaagaattccagatccttttacaaaagtcaacta
ttgaaagaagttttgatcaataggctgttggacaacaatgatgctgatatacaaataaag
gttctggattgtcttttgaactggaaggatgaatttttgcttccttatgagaaacatttg
aagaatcttgtcaattcaaaatatttgagagaagagcttgctacctggagtttgtccgag
gagtctaatttagttgaagaagagcatagagcccaaattgttcctcttgtcattcgattg
cttttgccaaaagtcagaagccttaaaacactagcatcaaggaagcatgcaagtgtgagc
aaccgaaaggcagtgcttgggttcattgctgaacttaatgtttcggagcttcctcttttc
tttcaattattgatgaagtctttgcagataagtgaacctagtaattacggaatggaaagt
tgtaccgggatttctaagaaaaacaatatggatgagtttgaattgtcaagtttattagat
cttttcaccacggagaggatcttggctattccctggaagaagagatatgggtttctacat
gtggttgaggaagttttgagaatatttgatgcttcacgtgttagtccatttcttgacctt
ctgttgggctgtgttgtccgggtactcaaaagctgtgcttcaagtattcccagtagaagt
aataagcaggctgctcaactcgacaattcttctgatgttaccttgccagaagatggaaat
gaagctgtgaaccataccagcttggatgtcaagcagttcaaagaaatgagatcgttatgc
ttgaagatcatttcgtttgttcttaataagtatgagggttatgattttggctctacattt
tgggagatattctttgaggcagtgaagcctttagtacatggattcaaacaggagggttca
agtagcgagaagccaagttccctgttcttttgctttattgcaatgagtcagagtccgatt
cttgtgtctcttttatgcagagaaaagaacctgataccagatatcttttcgattttatct
gttccaacagcttctgaagctataatttacagcgttctcaagtttatcgagaaccttcta
acccttgaagttgaacttgggattgatagatatgctatagaagaagttatacttttaaac
ctcgagggtcttgttgacagcctgcatactcttctttacaatttcacggagaaaaaaaga
aagttgctgaaacatcctggggaaacggttttgggagttttgaaattcttatcaaagttc
gtaaaggatcaagcgacagcacgaaagtttgtggatatcttgcttttgcttgcatcagat
ggaatcaagaattctgatgtatgtatgggagctttgcagatcctcagagatatagttcca
gccttacagagtgaaactaacactaaaatcttgaaggctataactcctattctcatttcc
gctcaaagggacgtgcgcttgtcaatctgtgatctacttgacgctctcgctgagaaagat
tcatctatacgctctatggcaaaactcgtatgtgaattaaattcaacatctgcgatggaa
atgggtgaacctgattttgatattatcatcaatgcttatgacagaattactgcagacttc
ttcgttggtgttagagaggatcaagcattagtgatactatcccattgtatttatgacatc
aaatctgaagaattaattctaaggcagagtgcatataagtcgctgcttacttttgttgaa
ttctctgctctcataattggggaaggcttgatgaagcaggaaggtgatgatggttattgg
actgatgtgcacatccagaatattgtaaataaattccttctgaagcacatgggagatgca
atgaccaaaggaacaacaatgcggaaggaatggattgacttgctgcatgagatggtcctg
aagctttcaggaattcaaaatcttggaactctgaaggtcctctgcagtgaagatgctgaa
gtagacttctttaacaacattgttcacttacagaaacataggagagccagggcattatca
cgctttagaaatattgcagctactgggaagctttctgagttcatgttgaaaaaagtgttc
atccccctcttcttcagtatgttgtatgacttgcaaatggggaagggagaacatctaaaa
actgcctatctggatgctcttgcatctatttctggtcagctaggatggaaatcatactat
aatatgctaatgaggtgtttcagggatatggaaaagaggcatgatagggaaaagatcttg
ttacgtcttgtttgttctattcttgatcagttccatttttctaagaatgtttcatcccaa
gacttaggacttcttgccaatgatgcgacagagaatgacctcaaacctatttcagtcatg
ctatccaatgtcagttctcccgcattttctgtaatacaggcctgtcttactagtatggta
ctgccaaagttacaaaaactgctgttatctgatccagaaaaagttaatgttattatcagc
gttgccatattaaaagttcttaaattacttcctgggaacaccctggatacccatctttcc
agtattattcatcgaatatcaaacttcctgaaaaatcgtctgcaaagcattcgtgatgaa
gcaagatgtgcgttggttgcatgtttgaaggaacttggatttgagtacctacaatttgtt
gtcaaggtcttgagggccacattgaaaagaggatttgagcttcatgttcttggatatact
gtcaactttatcttgtcaaaaggccttacagactctatggttggcaggctagattactgt
ttgggtgaactgcttagtgttgctgataatgacatttttggagaggtatccgagcaaaaa
gaggtggaaaaggttgctttcaaaatgaaagagactagaaagcagatgtctttcgattca
cttaagttgattgctgaaaatgtgactttcaaaacccatgggttaaagctgctctctcca
gtaacagctcatatgaagaagcatttgacaccaaaagtaaaattaaaactggagactatg
ctaactcacattgctgatggtattgagaaaaactcatctgttgatcagactgatcttttt
atcttcatatatagcctcattgatgattggctgtctgatgagaatcgtaaaagtgagact
ttattggtggaggggtcagtgatagaaaaaccttatgaggcaggaagtaaaacagctatg
agatgttttgttgggactgaaccacagtgctcatatcttattgcagtctttgctcttcga
ctgtttcataatcgtatgaaaaatttgaagtttgacaagagcaatgaccaactgctctca
atgttggatcccttcataaagccactgactatttgcttgaggtctaagtttgaagagata
atcgctgctgcgctcaagtgtttatatccaatgataagactgccttctccttctcttgaa
tctcaagctgacaagataaaagtgacattattggacattgcacaaagttcatctaatgta
aatactcctgtaatggagtcctgtctgaaattattgaccgccttgctccaaagcagcaaa
attaccctttccactgatcaattgcatgttttaatccagtttcctctctttgttgatctt
gagaaaaacccctcctttcttgccttgacacttttaaaagcaattgtacgtcgaaagctt
gtcgtccatgaaatatatgatgtggtaactcaagttgcagaattgatggtaactagtcaa
gaggaagccatgcgcaaaagatgcagtcagatactgttgcaattcttgctcaattatcaa
ctgtctcagaaacgcaggcagcagcatcttgatttccttgttgctcatctgaggtatgag
catgccactgggagggtagctgtgctggaaatgcttaagacaatcatcaagaggtttcca
gagagcataatatttgaacagtcaaagacattcttcctccatttggtgcatgctttggcc
aatgacgcagataatcaagttcgctccttgataggcattgttataaaacatcttatcggc
cgcataagctcacaaccacttgaaccgattttgaatatctgtcttgcttggtacttaggg
gagaaacaacaattacgtggcccagcagcacaggtccttggatttgttgttgaagtgatg
aagagaggatttctcaagcacattaatgatgtactgcctagaatgaagatgattgtgcag
tctaccaatgatgtgttaaatgttgaccagctaaatttaccggatcatgaaacaattccc
ttttggaaggatgcttattactcgtttgttttgttggaaaaaattcttacacagattcca
gatttgttctttgcgagggatattgaagatatatggctagcggtctctgagttccttgtg
catccgcacccatggatttgtaacatatccaaccgtcttatggcattatactttgagcag
atggtaaagcaaggaaagaaaataggaacaacttgcctcacaagcacaagtaggatgttc
ttgatagcttcctctctatgctgtcaattgaagattcaactccctgataaaggtgtaaga
agacttgttaagtgcaatattgcatttgcaatatgtgggattcagtctttattgcgtcaa
acagaattcaatgatcctggtacattttggccctcccttgatccacgtgagcaaggatgt
tttcttaaagcttgtcagctgcttgatcctaaaagcggaaagagtattactgcattgttc
acttgtggatttgatgatgaaaatcttggtcagaaaaataatgatattagctacttactt
gtgtctggtttacttaacacaatgggaagagctgctctccaaactgaggatgctcagaca
aagatgattcttggcagtattaaactgattgctgatcagaccagccaggaagactgccag
cagtacgcctatctgctgctgtttccaatttacaaactctgtgagggctttgctggaaaa
gtagtctcagatgatgtgaagcaacgtgcagaaaaagttcgtcaaaagttacaggacaaa
cttggtacccagaactttgtacaagcatacaaccagatgagacatgatcttggtgaaaaa
cgattcaagaggaagcgagaggagaaggtcatggctgtcgttaatcctgtcagaaatgcc
aagagaaaaatgagagtttccgccaagcatcaagcccataagaaaaggaaaatgatggca
atgaaaatgagtagatggatgcgttag
DBGET
integrated database retrieval system
