Beta vulgaris (sugar beet): 104890062
Help
Entry
104890062 CDS
T03548
Name
(RefSeq) protein CHROMATIN REMODELING 5
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvg03021
]
104890062
03036 Chromosome and associated proteins [BR:
bvg03036
]
104890062
Transcription machinery [BR:
bvg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104890062
Chromosome and associated proteins [BR:
bvg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
104890062
SLIK complex
104890062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
104890062
NCBI-ProteinID:
XP_010673723
LinkDB
All DBs
Position
4:2538071..2556907
Genome browser
AA seq
1718 aa
AA seq
DB search
MAFFRDYSSEAVTHRAMEDKNASQNVNRVHNSIDIDLNSSENDFEMKMDGNYQSDGEPDI
NRLPNEIAVNDGADLGPSTSHTYERRSGSSAPKWGSNFWKGSEPVGSHDVSDSGHESRSG
SEYRNDEGSEGNSYGGEDRLELEEFEEQKETEKIPVDEMLSDEYYEQDGDDQNDSLQYRG
LNPATLNPRPQSRTIVPTNSSSRNRRRPYGDADYAEEEDEEDDDGADGDDPDDADFDPEY
GVAGVPPRDKDDDWEVEDLDEDVESEGELDISDDDDLYYTKKPRVGQRGKIGRNAKASKG
QRSLSAPTRRRKGRVSDDEFSAEDSDDDSDEVVRTRRGVHPRKNSNLARQNETRTSSRSI
CKVSYAESEESEEVDEGKNKKSQKEDFEEEDADAIERVLWHQPKGMAEEAMKANKSTQPV
LLSHFFDTEPDWNEMEFLIKWKGRSHLHCLWRPLDELQNLSGFKKILNYMKKVAEDVRFR
MSVSREEIEVHDVSKEMDLDLFKQNCQVERIIADRINKDSSGEVNPEYLVKWQGLSYAEA
TWEKDVDIGFAQTAIDEYKAREATIAVLGKTVDAQRKKSKGSLRKLDEQPEWLKGGKLRD
YQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQINGPFLVVVPLSTLS
NWAKEFRKWLPDMNIVVYVGTRASREVCQQYEFYNEKNTGRLIKFDALLTTYEVILKDKA
VLSKIKWSYLMVDEAHRLKNSEASLYTALLDFSTKNKLLITGTPLQNSVEELWALLHFLD
PDKFRNKDVFVQNYKNLSSFNEIELANLHQELRPHILRRIIKDVEKSLPPKIERILRVEM
SPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGETND
GSKLERMILSSGKLVILDKLLVRLHETKHRVLIFSQMVRLLDILAEYLSLRGFQFQRLDG
STKAELRHQAMEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMS
RAHRIGQQDVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKEAKKAVT
FDKNELSAILRFGAEELFKEEKNEEESKKRLLSMDIDEILERAEKVEDKGIEGEEANELL
SQFKVANFCSAEDDTSFWSRWIKPEAVGQAEEALVPRGARFTKSYVEPVQPDGSNKRKKK
ETPSMRVNSKRRRGESSHMVPMIDGASAQVRDWSYGNLPKRDATRFAKAVMKFGNPSQID
LIATEVGGAIEAAPVEAQIELFDALVDGCQEATKGEIIDPKGPLLDFFGVPVKANDMLSR
IEELQHLAKRIGRYADPVSQFRVLRYLKPANWSKGCGWNQIDDARLLLGVYYHGFGNWEK
IRLDERLGLTKKIAPVELQTHETFLPRAPNLKDRASALLEMEISAVAGQKSNPKGRKSAK
NIESCNVPRPRGRGRGRPSSPKLLTQMEKTRSKRSQKLEPLVKEEGEMSDNEEVYEQFKE
VKWMEWCEDVMMDEERTLKRLQKLQTTSADLPKEKVLSKIRKYLQLVGRRIDQVVSEHER
ELHKQDRMMTRLWKYVSTFSNLTGDRLCQIYTKLKHEQEDEAGVGPSHINGHNAFQRQSA
RLKGLKNNNSYQTAEPGLKVHDPAKFEAWKRRKRAETDAFLEAQGPFQKPVSNGPRLPAS
NSLGILGAAPVPPDSRPYNNDRPYKMRQGGFQQRQGIR
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atggcattttttagggactattcgagtgaggctgtcacccacagagcaatggaggacaag
aatgcaagtcaaaatgtgaatagagtccacaattcgatagacatagacttgaattcgagt
gaaaatgattttgaaatgaaaatggatgggaactatcaaagtgatggtgaaccagatatt
aatagactaccaaacgagattgctgttaatgatggtgctgatttagggccatcaacctcc
catacatatgagagaagaagtggaagttcagctcccaaatgggggtctaatttctggaaa
ggtagtgaacctgtgggctcccatgatgtttcagactctggacacgaatctaggagtggt
tctgagtataggaacgatgaagggtcagaaggtaattcgtatggtggggaggacagatta
gaattagaagagtttgaagagcagaaggaaacagaaaagattccggtagatgagatgttg
tctgatgaatactacgagcaagatggggatgatcagaatgattcactgcaatatagaggt
ttgaaccctgctactttgaatcccagaccacaatcaaggaccattgtgcctacgaactcg
agttcacgaaatcggaggagaccttatggtgacgcagattatgcagaggaagaagatgaa
gaagatgatgacggggctgatggagatgatcctgacgatgcagattttgatcctgaatat
ggggttgctggcgtgcctccacgggataaggatgatgactgggaagttgaagatttagat
gaagatgttgaaagtgaaggagagcttgatatttcggatgatgatgatttatactatacg
aagaagcccagggttggtcaacgaggcaaaattggaagaaatgccaaggctagtaaggga
caaagatctctctctgcccctactcgaagaagaaaaggtagggtatcagatgatgaattt
tctgctgaggattctgacgatgatagtgatgaggttgttaggacaaggagaggtgtacat
cctcgcaaaaacagcaatcttgcacgccaaaatgaaacccgcacttcaagcaggtcaatt
tgcaaggtttcgtacgctgaaagtgaggaaagtgaagaagttgatgaagggaaaaataag
aagtcacagaaggaggattttgaagaagaggatgctgatgcaattgaaagggttttgtgg
catcagccaaagggaatggctgaggaagctatgaaagccaataaatccactcaacctgta
ttgttaagccacttttttgatactgaaccagactggaacgaaatggaattcttgattaag
tggaaaggccgatctcatctacactgtctgtggagaccattagatgagttgcaaaatctc
agtggtttcaagaagattttgaattacatgaaaaaggttgctgaggatgtaaggtttcgg
atgtcggtatcccgtgaagagattgaagtccatgatgtgagcaaagaaatggatttggat
ctgttcaaacaaaattgtcaggtggagagaataattgctgataggatcaacaaagatagc
tcaggtgaggtgaatcctgagtatctagtgaagtggcaagggctatcttatgctgaagcc
acctgggaaaaagatgtggatattggatttgctcagactgctatcgatgaatacaaggct
cgtgaagctactatagcagtgttggggaaaactgtggatgcgcagcgtaagaagagcaaa
ggaagtttgcggaaactggatgagcagcctgaatggctgaaagggggaaaattacgtgat
tatcagcttgaaggcttaaattttcttgtgaacagttggagaaatgatactaatgtcatc
cttgctgatgaaatgggtcttggtaaaactgttcaatcggtttctatgcttggtttctta
cagaatgctcaacaaatcaatggcccttttcttgttgtcgttccgttgtctacattgtcc
aattgggcaaaagaatttaggaaatggcttccagatatgaatattgttgtatacgtggga
actcgtgctagcagagaggtttgtcagcagtatgaattttacaatgaaaaaaacacaggc
aggttgatcaagtttgatgcattgttgacaacctatgaagttattctaaaggataaggca
gtgctgtcaaagatcaagtggagctatcttatggttgatgaagctcatcggttaaaaaac
agtgaagcttctttatatactgctctcttggattttagcaccaaaaacaagttactcatt
actggcactccgttacagaatagtgtagaggagctatgggctctgcttcacttcttggat
cctgataagtttaggaataaagatgtttttgttcaaaattataaaaatcttagctcattc
aatgagattgagcttgcaaatcttcaccaggagttgaggcctcacatccttaggagaatt
atcaaggatgtggagaaatctttgccgcctaaaatcgaacgaattcttagggttgaaatg
tccccgctgcagaaacagtattataagtggattctggaacgaaacttccatgacttgaac
aaaggtgttaggggaaatcaggtttcactactgaatattgtggtggaattgaaaaagtgt
tgcaatcatcccttcttatttgaaagtgctgatcacggttatggtggtgaaacaaatgat
ggcagtaaacttgagcgaatgattcttagtagtggaaagctagtgatacttgataagctg
cttgtgagactacatgaaacaaaacatcgtgttcttatattttcccagatggtgagactg
ttggacatattggcagagtatttgtctctgagaggtttccagtttcagaggcttgatggt
agtacgaaggctgagttacgacatcaggctatggagcattttaatgctccaggaagtgat
gacttttgctttcttctctcaacacgggctggtgggctgggcataaacctagcaactgca
gacactgttattatatttgattcagactggaaccctcagaatgatttgcaggcaatgagt
agagctcacaggatcggacagcaagacgttgttaatatctaccgatttgtaacaagtaaa
agtgttgaagaagatatacttgaacgggcaaagaaaaagatggtccttgatcatctggtt
atccagaagctaaatgcagagggtagactggagaagaaagaggccaagaaagcagttacc
tttgacaaaaatgaactttcagcaatattgaggtttggagctgaggagctatttaaggaa
gagaagaatgaggaggaaagcaaaaagagactgttgagcatggatatagatgaaattctt
gaaagggcagagaaggttgaggacaagggaatcgaaggggaggaagcaaacgagcttctc
agtcagtttaaggttgcgaacttttgcagtgcagaggatgatactagtttctggagccgc
tggataaagccagaagctgtagggcaagcagaggaagcattagttcctcgaggggcaaga
tttactaagagctatgtggagcctgtccaaccagatggaagcaacaaaaggaaaaagaag
gaaactccgtcaatgagggtaaattcaaaacgtcgtagaggagaatcttctcatatggtc
ccaatgattgacggagcctcagctcaagtaagggattggtcttatgggaatttgccgaag
agagatgcaacccgatttgcaaaagctgttatgaagttcggcaatccaagccagattgat
ctaattgcaactgaggttggtggtgcaattgaggcagctccagtagaagcgcagattgaa
ctttttgatgctctagttgatggatgtcaagaggcaactaaaggagaaattattgatccg
aagggacctctgttagacttctttggtgttcctgttaaggcgaatgatatgctaagtcgt
atagaggagctccagcacttagccaagcggatcggtcgatatgcagatcctgtttcgcaa
ttccgagtgctaaggtatttgaaacctgcaaattggtcaaaagggtgtggttggaatcaa
attgatgatgcaagattgcttttgggtgtgtattatcatggttttggcaattgggaaaaa
attaggttggatgaaaggcttggtttaacaaagaagatcgccccagttgagcttcaaaca
catgaaacgttccttcctcgtgctccgaatttgaaggatcgtgcttctgcacttcttgaa
atggagatcagtgctgttgccggtcagaagtctaatcccaagggtcgcaaatctgcaaag
aacatagagagttgcaatgtaccaaggcctcgcggaagaggcagaggtaggccaagctcc
cctaaacttttaacccagatggagaaaactaggtccaagagaagccagaaactcgaacct
ttagttaaggaggaaggtgagatgtcagataatgaagaagtatatgagcaatttaaggaa
gtgaaatggatggaatggtgcgaagatgtaatgatggatgaggaaagaacgttgaaacgt
cttcagaagttgcaaactaccagtgctgaccttcccaaggagaaggtactctcaaagatc
cgaaagtatttgcaacttgttggcaggagaattgaccaagttgtatctgaacacgagcgt
gaactgcataaacaagaccgaatgatgacgagattatggaaatacgtgtcaaccttttct
aatttgacgggggacagattgtgtcaaatttataccaaactaaagcacgaacaggaagat
gaagctggggtaggaccatcccacatcaatggacataatgcttttcaacgtcagtctgcg
agattgaagggactaaagaacaacaactcatatcaaacagctgaaccaggtcttaaagtc
catgatccagccaagtttgaggcttggaaacggagaaagagggccgagactgatgctttc
ttagaggctcaaggcccttttcagaaacccgtgagcaatggcccgagattgccagcatcc
aattccttgggaatactgggtgctgcaccagtaccacctgacagcagaccatataataat
gacaggccatataagatgcgtcaaggtggctttcagcagaggcaaggcattaggtag
DBGET
integrated database retrieval system
