Beta vulgaris (sugar beet): 104890351
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Entry
104890351 CDS
T03548
Name
(RefSeq) pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104890351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bvg03041
]
104890351
Spliceosome [BR:
bvg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
104890351
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
HIND
Motif
Other DBs
NCBI-GeneID:
104890351
NCBI-ProteinID:
XP_010674105
UniProt:
A0A0J8FEL6
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Position
4
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AA seq
378 aa
AA seq
DB search
MANRTDPLAKSIRGTNPQNLVEKIVRSKIYQNTYWKEQCFGLTAETLVDKAMELDHVGGT
YGGNRKPTPFMCLVMKMLQIQPEKDIVVEFIKNEDYKYVRILGAFYLRLTGTDSDVYLYL
EPLYNDYRKLRMRKQDGQFLLTHVDEFIDELLTKDYSCDIAMPRIKKRWNLENVGALEPR
RSALEDDFEEEEEKEEDEMDVDVDEHEKDYRGRSPVRDRDRKRDSHRYRDRDYDRDYDRD
YDRERGRGRDRDRDRDRDRDRDRDRDRYRIREEKEYGRDRDREGRERDRRDRDRRRRSRS
RSRSRSKERKDRDGDRKRHGRSPSPRRHGDEDGGAREEPKKKKKEKKEKKDDGTDHPDPE
IAEANKLRAKLGLKPLQL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcgtacggacccattagcgaagagtataaggggtacaaatccacaaaactta
gtagaaaagatagttcgatcgaagatctaccagaatacttactggaaagaacaatgcttc
ggtctcaccgccgaaactctcgtcgacaaagccatggaactcgatcatgtcggcggcact
tacggcggaaatcgtaaacctactccttttatgtgtcttgttatgaagatgcttcagatt
caacctgagaaagatattgtcgttgagttcatcaaaaacgaagattataagtatgtgagg
atccttggggccttctatttacgccttaccggaacagattccgatgtctacttgtactta
gaacctctgtacaacgattatcggaagctgcggatgaggaagcaggatgggcagtttttg
ctgacccatgtggatgagttcatcgatgaactcctcactaaagactattcatgtgacata
gctatgcctcgcattaagaaaagatggaatcttgagaatgttggtgctctggaacccaga
agaagtgccctagaagatgatttcgaggaggaggaagaaaaggaagaagatgagatggat
gtagatgttgatgaacatgaaaaggactatcgcggtaggagtcctgtcagagatagggat
aggaaacgtgacagtcacagatacagggatagagattatgaccgtgattatgaccgtgac
tatgatagagaacgtggaagagggagagatagagatagagatagggacagggaccgagac
cgagacagggaccgagatcgttatcgcatcagagaggaaaaggagtatggccgtgataga
gatagagaaggtagggaaagggataggcgtgacagggatcgtaggcgaaggagtcgctct
agaagccggagtaggagtaaggaacgcaaggatcgtgatggtgatcgtaagaggcatggt
agaagtcccagtcccagaaggcatggagatgaggatggtggtgcacgcgaggagccgaag
aagaagaagaaagagaagaaggagaagaaggatgatggaacagaccaccctgatccagaa
attgctgaagctaacaaacttcgtgcaaaacttgggttaaaaccattgcagttgtag
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