Beta vulgaris (sugar beet): 104890427
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Entry
104890427 CDS
T03548
Name
(RefSeq) transcription initiation factor TFIID subunit 12b
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104890427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvg03021
]
104890427
03036 Chromosome and associated proteins [BR:
bvg03036
]
104890427
Transcription machinery [BR:
bvg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104890427
Coactivators
SAGA/TFTC/STAGA complex
104890427
Chromosome and associated proteins [BR:
bvg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
104890427
STAGA complex
104890427
TFTC complex
104890427
SAGA complex
104890427
SLIK complex
104890427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
104890427
NCBI-ProteinID:
XP_010674213
LinkDB
All DBs
Position
4:complement(5955222..5964953)
Genome browser
AA seq
723 aa
AA seq
DB search
MADTSTSSPKHLQSSNVMEPPPSMVQNSTNNSMASPSNLSHNSPSIDIPRISSPLSQISQ
QQPQQLQQQQQQPQQQQQQQQQINPNIAAAVQQQLIQQQYQQQQQQNLMGMSGGTGMSTG
VSGISNSFQTQQGMNRSASLSRMNQIQQSQVQQQLQQQQQQQLQQQGNPQQQQQQQQHQL
GMLRQHAAMYGQMNFGGSMLNQQFRQQQQQLQQPQQQLQQQQQQQQQQQQQSQQQPQQSQ
QQQQQQQLQQTQQQQPQQQQQLSSGNLSRSMMMGQSGSLPVLSGQASATPTQFNNLQSQL
LASPRQRAGILQGSQFPSGNASAHMQALQMMGFGSQLRANGSVSYGQQRINSAQLRQLSQ
QNPLLSPQKNQSQNLSRTPSLAYTNSQLSGLSQNGQPAVMQNSLPQQQWFKQMPAMSAPG
SPSLRLQASQRQQQSVGQSSQLQQSMSLNSQQLSQLVQQQSSMGHPQVQQTSQQMRQLQQ
SPSVQQQQHQQPSQQQQLQQQQQQQQQQPQLLQQPSPIQQQLSPRIQGPPGQKSLSLTGS
QPDATVSGTTTPGGSSSQGTEAMNQLLGKRKIQDLVSQVDAHGKLDPEVEDLLLEIADDF
IDSVTTFACNLAKHRKSSTLESKDVLLHLEKNWHLTIPGYSSEDRKSNTDNPSCDAHRKR
LDMIRALMESSQSGFYPNNSKEMVRQGIGNLPSANHMMKASPSTEQLVAQSTASQMLQQM
TRF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggccgatacttcaacatcttccccaaaacatcttcaatcgtcgaatgtaatggaacca
cctccatcaatggtgcaaaattcaaccaataattcaatggcttcgccttcaaatctttca
cataattctccttctattgatattccacgtatttcatctcctctttctcaaatctctcaa
caacaacctcaacaactacaacaacaacaacaacaacctcaacaacaacaacagcagcaa
caacaaattaatcctaatattgctgctgctgtacaacaacaattgattcagcaacagtat
caacaacaacagcaacagaatttgatgggtatgagtgggggaacaggaatgagtactgga
gtttctgggatttcgaatagttttcagactcaacaaggtatgaatcgatccgcttcgttg
tcgaggatgaatcagattcagcagtcacaagttcaacaacagttgcagcaacaacaacag
cagcaattgcaacagcaagggaacccacaacagcaacaacagcagcaacaacatcagctt
gggatgttgaggcaacatgctgctatgtatggacagatgaattttggtgggtctatgtta
aaccaacagtttaggcagcagcaacagcaattacagcagccgcagcaacaactgcagcag
caacaacaacaacaacagcagcagcagcagcagtcgcaacagcaaccgcaacaatctcag
cagcagcaacagcagcagcagttgcagcaaacccaacagcagcaaccgcagcagcaacaa
caattgagcagtggcaatttgtcgcggtcaatgatgatgggtcaaagcgggtctttgcct
gtgttgtctggacaagctagtgctactcctacccagttcaataatctccagtcacaattg
cttgcttcgcctaggcaaagggcgggtatcctccaaggatcacaatttccatcaggaaat
gcatctgcgcatatgcaagcattgcagatgatgggttttggttcacagctgagagcgaat
ggctcagtctcgtatgggcaacaacgcatcaattcagcccagttgagacagttatcacaa
caaaatccacttttgtcaccccagaagaatcagagccagaacctgtcacgcacgccatca
ttggcatatacgaattctcagttatctggcttatctcaaaatggacagccagctgtgatg
cagaactctttgcctcagcaacaatggttcaagcaaatgcctgctatgtctgcccctggc
tccccttcactgcgtctgcaggcaagccaaagacagcaacagtcagtgggtcaatcttct
cagttgcagcagagcatgtccttaaattcccagcaattatctcagcttgttcagcagcag
tcatctatgggacatcctcaggtgcagcaaacatctcagcaaatgcgacagctgcaacag
tcaccatcggtgcagcaacaacaacatcaacaaccatcacaacaacagcagctacagcag
caacaacaacaacaacagcagcagccgcaactcctgcaacaaccatcacctattcagcag
cagctatctccaaggatacagggaccaccaggccaaaagtctttaagcttaactggatca
cagccagatgctactgtatctgggacaactactccgggggggagttcaagtcaaggaaca
gaagcaatgaaccaactccttgggaaaagaaagatacaagacttagtttcccaggtagat
gcacatggaaagctggatccggaagttgaagatctccttttagaaattgctgatgacttc
attgattcagtgactacatttgcatgcaatttggcaaagcatcgaaaatcctcaacatta
gaatccaaggatgtgttgctacacctagaaaaaaattggcatctgacaatcccggggtac
tcgagtgaagataggaaaagcaacaccgacaacccttcgtgtgatgctcacagaaagcgc
ctcgatatgattcgtgccctgatggagtcctcacagtcggggttctatccaaacaattct
aaagaaatggtgagacaggggattggtaacttacctagtgctaatcacatgatgaaagcg
tcccctagtacagagcaacttgttgcacagtcaactgcttctcaaatgcttcagcagatg
acaaggttctga
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integrated database retrieval system
