Beta vulgaris (sugar beet): 104890431
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Entry
104890431 CDS
T03548
Name
(RefSeq) protein PIR
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvg03019
]
104890431
Messenger RNA biogenesis [BR:
bvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104890431
Factors involved in mRNA localization
Other mRNA localization factors
104890431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
TBD
Motif
Other DBs
NCBI-GeneID:
104890431
NCBI-ProteinID:
XP_010674218
LinkDB
All DBs
Position
4:complement(6014083..6036033)
Genome browser
AA seq
1286 aa
AA seq
DB search
MAVPVEEAIAALSTFSLENDQPEVQGPAVWVSSDRGATTSPIEYSDIAAYRLSLSEDTKA
LNQLNTLIHEGKEMASVLYTYRSCIKALPQLPDSMKHSQAELYLETYQVLDLEMSRLREI
QRWQASAASKLAADMQRFSRPERRINGPTVTHLWSMLKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSVQWQDTDSMREELDDLQIFLSTRWAILMNLHVEMFRVNNVEDILQALIV
FSVESLELDFALLFPERHTLLRVLPVLVVLATTSEKDTEALFKRVKINRLIGIFKSDPVI
PAFPDLHLSPAAIMKELSSYFPKFASQARLLALPAPHELQPREVQDYQRQYLIINHIGAI
RAEHDDFTVRFASSINQLDLLKSTDGAEVEWSKDVKGNMYDMAVEGFQLLSRWTGRIWEQ
CAWKFSRPCKDQTSEETNNTSTLYSDYEKVVRYNYSAEERRALVELVGYVKSIGSMMQRC
DTLVADALWETIHAEVQDFVQNTLATMLRTTFRRKKDLSRILSDMRTLSADWMANTSKQE
TELQSLQQEGEVSKGSYLYPRPVAPTAAQVHCLQFLIYEVVSGGNIRKPGGLFSNTGSEI
PVEDLKQLETFFYKLGFFLHLLDHTVTIATLTDLGFLWFREFYLETSRVIQFPIECSLPW
MLVDYVLESQNAGLFESVVMPFDIYNDAAQQALTVLKQRFLYDEIEAEVDHCFDIFVSKL
CDIIFTYYKSWAARELLDSSFLFAVDNGEKYSVQPMRFNALFKMTRVKLLGRSIDLRCLI
SQRMNKAFRENLEFLFDRFESQDICAIVELENLVNILKHAHKLLCEDLTIDSFNLIFSEM
QENLSLVSYSSRLAYQIWTEMQNDFLPNFILCNTTQRFVRSPKLSNGRVQKPSMPYSKPN
FYCGNQDLNSAHQSFTRLHNGFFGMPHMFSIVRLLGTRSLPWLLRALLDHISNKISSLEA
TITGLQEALPKSIGLLPFDGGVTGCMKHIKEQLNWTSKTELKQEVLQGIKEIGSILYWMG
LLDIVLREVDTSRFMQLAPWLGFIPGADGQILLSQGEGESPIVNLLKSTTTAIVSNPSCS
NPSSFYTMSKQAEAADLLYKANLNTGSVLEYALAFTSAALDKYCSKWSATPKTGFIDITT
SKDFYRIFSGLQIDYLEESVQGVPSNHEVLGDSVAWGGCTMIYLLGQQLHFELFDFSYQV
LNAAEVEVTELTQMHKNLQGIQGWEPLIEAMKKARRLNNHVFSMLKARCPLEDKVACAIK
QSGTPLHRIKFENTVSAFETLPQKST
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggctgttccagttgaagaagccattgctgctctatccacattctcacttgagaatgac
cagcctgaggtgcaagggccagcagtttgggtgtcatctgatagaggcgcaactacaagt
ccaatcgaatatagtgatattgctgcttatcgcctgtctctatcagaagacacaaaagct
cttaatcagctgaacacgcttatccacgaggggaaagagatggcatccgtgctatataca
tatcgaagttgtataaaggcgcttcctcagcttcctgattccatgaaacatagccaagct
gaactatatttggagacatatcaagttttggacttggagatgagtcgtttacgtgaaatt
cagcgatggcaggcatcagcggcatctaaactagcagctgacatgcaacgcttttcaagg
cctgagagacgcatcaatggccctactgtaactcatctttggtccatgttgaagctgctg
gatgttttagtgcaacttgaccatctaaaaaatgcgaaagcaagcataccaaatgatttt
tcttggtataagaggacgtttactcaagtcagtgttcagtggcaagacaccgattcaatg
agggaggaattagacgatttacagattttcttaagcacaaggtgggctattctaatgaac
ttgcacgtggagatgttcagggtgaacaatgtagaagatatccttcaagctctgatagtc
ttctctgttgagtctctggagttggattttgcacttctctttccagagcggcatactctg
ttgcgtgtcctgcctgttcttgtagtcttagcaactacatcagagaaagatactgaagca
ctctttaagcgggtcaaaatcaaccgacttataggaattttcaagagtgacccagttata
cccgcatttccagaccttcatctttctcctgctgctattatgaaagagttgtcatcatat
tttccgaagtttgctagtcaagctcgtcttcttgctctcccagcaccacatgagcttcag
cctcgtgaggttcaagattatcagcgacaatatcttataattaatcatattggtgctatt
cgggctgaacatgatgattttacagttcgttttgcttcatccatcaatcagttagattta
ttaaaatccacagatggtgctgaagttgagtggtccaaagatgtcaaaggcaacatgtat
gatatggctgttgaaggatttcaacttctgagcagatggactggccgcatctgggaacaa
tgtgcatggaaattttctcgcccgtgcaaggaccaaacttctgaagaaacaaataatact
tcaacattatattctgactacgaaaaggttgtacggtataattacagtgcagaggagagg
agagcattggttgagcttgttggttatgttaaaagcattgggtcaatgatgcagcgttgt
gatacattagttgctgatgccttatgggaaacaatccatgctgaagttcaggattttgtt
cagaataccttagcaactatgctgcgtactacctttaggagaaaaaaggacctttctagg
attttgtctgatatgcggaccctttcagctgattggatggcaaatacaagcaagcaagag
accgagttgcaatctctgcagcaagaaggtgaagtaagcaaggggagctacctgtatcca
aggccagttgcaccaacagcagctcaggtccactgcttgcagttcctgatctatgaggtt
gtctctggcggtaatattcgaaagccaggtgggctcttcagcaatactgggtcagagata
cctgttgaggatttgaaacagttggaaacctttttctacaagcttggcttctttctgcat
ttactagaccacacagtgacaatagcaacactgacggatcttggcttcctttggttcaga
gaattctatttggaaacatcccgtgtcattcagtttccaattgagtgctctcttccttgg
atgctggtggattatgtgcttgagtctcaaaatgcgggcctttttgagagtgttgttatg
ccatttgacatctacaacgatgctgctcaacaggcattaactgtgctcaagcagcggttc
ctctatgatgaaattgaagctgaggtggaccattgttttgatatttttgtctccaaattg
tgtgatattattttcacatattacaagagttgggcagcgagagaattgctcgactcctca
ttcctctttgcagtggacaatggagaaaaatactctgttcaacctatgagattcaatgcg
ctatttaaaatgactagagtaaagttactgggaaggagcattgatttaagatgcctgatt
tcacaacgtatgaacaaggccttcagagagaacctggagtttctgtttgatcgttttgag
tctcaagatatctgtgctatcgttgaattggaaaacctcgtaaatatcttaaaacatgcc
cataagttgctgtgtgaggatctgacaatagactccttcaatcttatcttcagtgagatg
caagagaacttatctcttgtttcttattcaagtcgacttgcttaccagatctggacagaa
atgcagaatgatttccttccaaacttcatattatgtaatactactcaacgatttgttcgg
tcaccgaaactgtctaatggtcgagttcagaagccatcgatgccttattccaagccaaac
ttctactgtggtaaccaagatttaaattctgcacatcaaagctttacgaggttgcacaat
ggcttctttgggatgcctcacatgttttccatcgtccgccttttgggaacccggtctttg
ccatggctgcttcgcgctcttctggatcacatatctaataagataagttctcttgaagca
acgattacaggattacaagaagcattacccaaatcgataggtctgctaccctttgatggt
ggtgtgacaggttgcatgaaacatataaaagagcagcttaactggacctcaaagacagaa
ctcaagcaggaagttcttcaggggattaaggagataggaagcatactatactggatgggt
cttctagatattgtcttgagggaagtggatacatcacgctttatgcaactcgcaccctgg
cttggcttcatacctggtgcagatgggcaaatcctgctatcacaaggagagggggaaagc
cctattgtcaatctcctgaaatcaaccactactgcaattgtttcaaatcctagttgctca
aatccatcatccttctacacaatgtcaaaacaggcagaagcagcagatctcttatacaaa
gcaaatttgaatactggaagtgttctggaatatgctcttgcatttacaagcgcagcattg
gacaagtactgtagcaagtggagtgcaactccgaagacaggattcatagacattacaact
tcaaaggatttctaccgaatatttagtggtcttcaaattgattatttggaggaatctgtt
caaggagtccctagtaatcatgaggtgctgggagattcagtagcatggggaggctgtaca
atgatatatttacttggtcagcagctgcattttgaactttttgatttctcatatcaagtc
cttaacgctgcagaagttgaggttacggaacttacacaaatgcataaaaatctccagggt
atacagggatgggaacccttaatcgaagccatgaagaaagcgaggaggttaaacaatcac
gtgttttcaatgctgaaggcgcgttgtcctcttgaagacaaagtagcatgcgcgataaag
caaagtggaactcctctgcatcgaattaagtttgaaaacacagtctcagcatttgaaact
cttccacagaagagcacctga
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