Beta vulgaris (sugar beet): 104890594
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Entry
104890594 CDS
T03548
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03030
DNA replication
bvg03410
Base excision repair
bvg03420
Nucleotide excision repair
bvg03430
Mismatch repair
bvg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104890594
03410 Base excision repair
104890594
03420 Nucleotide excision repair
104890594
03430 Mismatch repair
104890594
03440 Homologous recombination
104890594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvg03032
]
104890594
03400 DNA repair and recombination proteins [BR:
bvg03400
]
104890594
Enzymes [BR:
bvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104890594
DNA replication proteins [BR:
bvg03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
104890594
DNA repair and recombination proteins [BR:
bvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
104890594
MMR (mismatch excision repair)
DNA polymerase delta complex
104890594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
REV3_N
divDNApol
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
104890594
NCBI-ProteinID:
XP_010674438
LinkDB
All DBs
Position
4:8210777..8231774
Genome browser
AA seq
1085 aa
AA seq
DB search
MNGGNSKKRTAPQQQPSPAQQKHHAAMEEEEFDEDVYYSQDGLIDEDTQILRDIEERSAK
KLRLSKWARPQLSESYKSQSQSIVFQQLEIDYVIGDCNKEILLNRSGSAAIIRIFGVTRE
GHSVCCHVHGFEPYFYINCPLGMGPDDISRFHQVLEGRMREANRNAKVPQFVRRIELVQK
RSIMYYQQQSSQPFLKIVVALPSMVATCRGILDRGIQIDGLGTKSFMTYESNVLYALRFM
IDCNIVGGNWIEVPVGKYKRTGKSLSSCQLEFDCLYADLISHDPEGEFSKMAPFRILSFD
IECAGRKGLFPEPTHDPVIQVANLVTLQGEDKPFVRNVMTLKSCAPIVGVDVMSFDSEKE
LLLAWRDLIREVDPDIIIGYNICNFDLPYLIQRATALGIAEFPVLGRIRSSRVRVKDATF
SSRQYGIRESKEVTIEGRVQFDLLQVMQRDYKLSSYSLNSVSAHFLGEQKEDVHHSIISD
LQNGNAETRRRLAVYCLKDAYLPQRLMEKLMFIYNYVEMARVTGVPISFLLSRGQSIKVL
SQLLRKAKQKNLVIPNSKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAY
NLCYCTLVTPEDIRKLNIPPECVNKTPSGESFVKPELQKGILPEILEELIAARKRAKADL
KEAKDPLEKAVLDGRQLALKISANSVYGFTGASIGQLPCLEISSSVTSYGRQMIEHTKKL
VEDKFTVVGGYEHNAEIIYGDTDSVMVQFGVSTVQEAMKLGREAAEYISGTFTKPIKLEF
EKVYYPYLLISKKRYAGLFWTNPDQYDKMDTKGIETVRRDNCLLVKNLVTECLHKILIER
DVPGAVQYVKSTISDLLMNRLDLSLLVITKGLTKTGENYEVKTAHVELAERMRKRDAATA
PNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDPQYYLENQITKPILRIFEPILK
NASRELLHGNHTRSISISTPSNSGIMKFAKKHLTCIGCKALISGSNKTLCSHCKGREAEL
YCKTVANVSELETLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMGEAKVQL
DRWSF
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcggaaactcaaagaagcgcacagcaccgcagcaacaaccttcacctgcgcag
cagaaacaccatgctgcaatggaggaagaggaattcgacgaagatgtatactactcacaa
gacggcctcatcgacgaagacactcaaattcttcgcgacatcgaagaacgttccgccaag
aagcttcgtctctctaagtgggctcgtcctcaactttccgaatcctacaaatcacaatct
cagagtatcgtttttcagcaattggagattgattatgtgattggagattgtaataaggag
attttgttaaatcggagtggttctgctgcgattattcggattttcggggttactcgggaa
gggcacagtgtttgctgccatgtacatggatttgaaccctacttttacataaattgtccg
ttagggatgggtccagatgatatatcccgttttcatcaagtcttggagggacgaatgagg
gaggcaaataggaatgccaaggttccgcaatttgttcggcgcattgagttagtgcagaaa
aggagcataatgtattatcaacagcaaagttctcaaccttttctgaaaatagtggttgca
ttgccttctatggttgctacttgtcgtgggattcttgatcgtggcattcagattgatggc
cttgggaccaagagttttatgacttacgaaagcaatgtcctctatgctctacgtttcatg
attgattgcaacattgttggtggaaactggattgaggttcctgttggaaagtataagaga
acaggaaagagcttgtcttcttgccagctggaatttgattgcttatatgcagacttaatt
agccatgatccagaaggagagttttcaaagatggccccattccgcattttaagttttgac
attgagtgcgctggtcgcaaaggtctttttcctgagcccactcatgaccctgtcatccag
gtggcgaatttggtgacattacaaggtgaagataagccatttgtccggaatgtcatgact
cttaagtcatgtgctcccattgttggtgttgatgtcatgtcctttgacagtgagaaagaa
ctgttgcttgcttggagggatttaatacgagaggtagatcccgacataattattggatac
aacatctgcaattttgacttaccatatcttattcagagagcaactgccctaggaattgct
gagtttcctgtccttggccgcataaggagcagtagggttcgtgtcaaagatgcaacattc
tcttcaaggcagtatggaataagagaaagcaaggaagttacaattgaggggagagtacaa
tttgatttgcttcaggttatgcaaagagattacaaactaagttcctattctttaaattct
gtatcggcacatttccttggtgagcagaaagaggatgttcatcattccataatatctgat
ctacaaaatgggaatgcagaaactaggagacgtcttgctgtttactgtttaaaggatgct
taccttcctcagcggctgatggagaagctgatgttcatttacaattatgttgaaatggct
agagtgacaggagtccctatatcgtttcttctctccagggggcaaagtattaaggttctt
tctcaacttctgaggaaggcaaagcaaaagaatcttgttataccaaactctaagcaggca
ggatctgagcaaggaacgtatgaaggagcaactgtgttagaggcccgagcaggtttttat
gagaagccaattgcaacgctggattttgcttcactatatccatctattatgatggcgtat
aatttatgctattgtacactggtaacaccggaagacattcgtaaactcaatatacctcca
gaatgtgttaacaagactccatctggtgaatcctttgttaagccggagcttcagaaggga
atacttccagaaattcttgaagagctcatagctgctcgtaaaagggctaaagcagattta
aaggaagctaaagatcctctggagaaggctgtcctagatggtcgtcagctggccttgaag
ataagtgcaaattctgtttatggatttacaggagcctcaattggccaattaccatgttta
gagatttcttcgagtgtcacaagctatggtcgtcagatgattgaacatacaaagaagctt
gttgaagataaattcactgttgttggaggctatgagcataatgctgagattatctatgga
gacacagattcagttatggttcaatttggtgtttccactgttcaagaagctatgaaatta
ggaagggaagctgctgaatatataagtggcactttcacaaagcccatcaagctggagttt
gagaaggtttattatccatatctgttgattagcaagaagagatatgctggccttttctgg
acaaaccctgaccaatacgacaaaatggataccaaaggaattgaaacagttaggagagac
aattgtctactcgtcaaaaacttggttactgaatgccttcataagatacttattgaaaga
gatgtcccaggagctgtccagtatgtcaagagtaccatctcagatcttttgatgaatcgt
ctagacctgtccttgttggtcattacaaagggtctaacaaaaacaggggaaaactatgaa
gtaaaaacagctcatgttgagcttgctgaacgcatgcgtaagcgagatgctgctactgca
cccaatgttggtgatagagtaccttatgtcattattaaagctgccaaaggtgccaaggcg
tatgaaagatcggaggatccaatatatgtgctggaaaataatataccaatagaccctcaa
tattaccttgaaaatcaaattaccaaaccaatattgaggatctttgaaccaattttgaaa
aatgcaagcagagagttgcttcatggaaatcacacaagatccatttccatctctactcct
tcaaatagtggcatcatgaaatttgccaagaaacacctcacatgcattggctgcaaagca
ttgattagtggctccaacaaaaccctttgctcgcattgcaagggaagagaagctgaactt
tattgtaagacagtggccaatgtttcagagcttgaaacacttttcgggaggctgtggaca
caatgccaggagtgccagggttcccttcatcaggatgtgctttgtacaagtcgtgattgc
ccaatattttatcggagaaagaaagcacaaaaggacatgggtgaagccaaggttcagcta
gatagatggagcttctga
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