Beta vulgaris (sugar beet): 104890655
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Entry
104890655 CDS
T03548
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bvg01009
]
104890655
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvg03021
]
104890655
Enzymes [BR:
bvg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
104890655
Protein phosphatases and associated proteins [BR:
bvg01009
]
HAD phosphatases
Fcp/Scp phosphatases
104890655
Transcription machinery [BR:
bvg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104890655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
DUF6706
Motif
Other DBs
NCBI-GeneID:
104890655
NCBI-ProteinID:
XP_010674526
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All DBs
Position
4:9312924..9320238
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AA seq
730 aa
AA seq
DB search
MEKDRITTVSEVVHKLQLALLNGIEDDNQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC
SNSLPVERSKKGQYRISIKEHRVYDLSETFLYCDSSCLINSKAFAGSLKEERCSVLNPAK
VDEILRLFKNVGLENEEEGKGKNGELGLSKLTIKENAETKRGEVSMEEWVGPSNAIEGYV
PQRDRQSKSSTSKKGSEPGNSKLNKHNDVVRNGADFDVNLESSEGTTGLRKIYENDKLKN
FEPMEQLLSDINFTSVIITNDEYTASKKLEGNSKSGYSGTKEGGSQVKKFVSNKGEDSIF
GTVDFMSTIINQDEYSVSKLPFGQVTSDPNQISQELSENLDAGGAEKQFKLPEESTCPAE
NGPSTSMDSVIEAGNAKLAKVSFHLDQKDATSSSRNVIDESQVEIVVHSSQAKGKSALRT
SGEKKAARSVTWADEKPNGLAGGNLCEFREFKNTKDDPSTSKGKEAWEDDDSQRFSSAEA
CAMALIQAAEAVASGQSDANDAVSEAGITVLPQPQTVNEGGYSVKDDALDDEALEKRPKM
PGNLDSKFFDSDKSWFDAAPEGFSLTLSPFALMWDALFSWLTSSSLAYIYGREECCHEEY
MYVNGREYPSKAVLPDGRSPEIKRTLAACLARALPGLIADLKLPTPVSLLEHELAHLLDT
MSFVDALPPFRMKQWQVIVLLFLDALSVCRIPGLPAYLTSRRILIPKVLKGAQLRPEEYE
IMKDLMIPLG
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagatagaataacaactgtatcagaagtagtgcataagctgcaacttgcactt
ttgaatggtattgaagatgataatcagttgtttgctgctgggtctcttatgtcaaggagt
gattatgaagatgtagtgaccgaacgttcgattgctaacctatgtggttatccattgtgc
tcgaattctctgcctgtggaacgctcgaaaaaggggcaataccgaatttcgatcaaggag
catagggtgtatgatttgagtgagacttttttgtattgtgattctagttgtttgattaat
agcaaggcgtttgccgggagtttaaaggaggagagatgctcggttttgaaccccgcgaag
gttgatgagatattgaggttgtttaagaatgtgggattggaaaatgaggaagaggggaag
gggaagaatggggaattggggttgtcaaagttgacgattaaggagaatgctgagacgaaa
agaggggaagtttcgatggaggagtgggttggtccatcaaatgccattgaaggctatgtc
ccccaaagagatcgtcaatcgaagtcatccacttcgaaaaaaggttctgaaccaggtaat
tcaaaattgaataagcacaatgatgtagttcgaaatggggctgactttgatgttaatctt
gagtccagtgaaggaacaactggtcttagaaaaatttatgaaaatgacaagctcaagaat
tttgaaccaatggaacaactgcttagtgatataaacttcacaagtgtgatcataaccaat
gatgaatatactgcttctaagaagttggaaggtaattccaagtctgggtattctggaacc
aaagaaggtggctctcaagtgaagaagtttgtctcgaataagggcgaagattcgattttt
ggcactgtagactttatgagcaccataattaaccaagacgaatactctgtctccaaattg
ccttttggtcaagtcacatctgatccaaatcaaatctctcaagaattgtcagaaaatttg
gatgctggtggtgcagagaagcagttcaaactccctgaggagtccacttgtcctgcagag
aatggtccttcaacatctatggattcagtcatagaagctggaaatgcaaagttagctaaa
gtttcttttcacctggatcagaaagatgccacttcaagtagcaggaatgtgatagatgag
tctcaagttgagatagttgttcactctagtcaagcgaaaggaaaatctgctcttagaact
tctggggaaaagaaagctgcacgttctgtaacttgggctgatgagaagcccaatggtctt
gctggtggaaatctctgtgaatttcgagaatttaagaacacaaaagacgatcctagtaca
tcaaaaggcaaagaggcttgggaagacgatgattctcaacgatttagctctgccgaagct
tgtgcaatggcattgatccaggcagcagaagctgttgcatctggacaatctgatgctaat
gatgctgtttctgaggctgggatcacagtgctgccacagccacaaacagtcaatgaaggc
ggatattctgtcaaagatgatgcattggatgacgaagctcttgaaaagcggcctaagatg
ccagggaacttagattctaaattctttgactctgataagtcatggtttgatgcggctcca
gaaggatttagcttgacattgtcaccttttgccttgatgtgggatgcactcttttcttgg
ctgacatcctcctcactggcctatatatatggaagagaggagtgttgccatgaagagtat
atgtatgttaatgggagagaatatccgagcaaagcagtacttcctgatggtcgttctcca
gaaatcaagcgaacattagctgcttgtcttgcacgtgcgttgcctggactgatagctgat
ctcaaactgcccacaccagtatcccttctggaacatgaattggcccacttgctggacaca
atgtcttttgtggatgcactacctccattcagaatgaagcaatggcaagtaattgttctt
ctgttccttgatgctctttcagtctgtagaattcctggactacctgcatacttgacaagc
aggaggattttgattcctaaggtcttgaaaggtgcccagctaaggcctgaagaatacgag
atcatgaaagacctcatgattccactgggttga
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