Beta vulgaris (sugar beet): 104892270
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Entry
104892270 CDS
T03548
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104892270
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bvg01009
]
104892270
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bvg03041
]
104892270
Protein phosphatases and associated proteins [BR:
bvg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104892270
Spliceosome [BR:
bvg03041
]
Common components
Common spliceosomal components
SR proteins
104892270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
104892270
NCBI-ProteinID:
XP_010676454
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All DBs
Position
5:3168942..3174110
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AA seq
214 aa
AA seq
DB search
MSHSRDERSPSPNGSASPAIRHQRSRSRTRSPPRRSRSGSPEDASNPGNNLYVTGLSTRV
TNSDLEKFCGKEGKVLECCLVTDPRTKESRGFAFVTMETREGAERCIKYLNRTVLEGRLV
TVEKAKRSRGRTPTPGRYQGLRKERGGPGGRGRRRSRSFSPRRRYDRGHYGRDPYPRDRR
GRSRSPYGRRPDDYPDSYRRRRERSFSAGRGGYP
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtcacattcaagggatgaaaggtctccttcaccaaatggttctgcctcacctgctatc
aggcatcaacgatcaaggtcgaggacaaggtcacctcctagacgtagtcgatctgggagt
cccgaagatgcatctaatcctggaaacaatttgtatgtgactggtttatccacaagggtt
actaacagtgatctggagaagttctgtggcaaagaagggaaggtccttgaatgctgtttg
gttactgatcctcgcaccaaagaatcccgtggctttgcctttgtgactatggaaactaga
gaaggagctgaacgatgtatcaagtatctgaatcgcactgtgcttgagggccgattggtc
acagtggaaaaggcaaaacgatctcgtgggagaacaccgactcctggtcgataccagggt
ctgaggaaagaacgcggaggaccaggaggtcgaggtcgtagacgatctcgcagtttctca
ccccgacggcgttatgatagaggtcattatggcagagatccttatcctcgtgacaggcga
gggagatcacgatctccctatggaaggagaccggatgattatcctgactcttataggagg
cgtagggaacggtccttctcagcaggccgtggtggctacccatga
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