Beta vulgaris (sugar beet): 104892377
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Entry
104892377 CDS
T03548
Name
(RefSeq) histone deacetylase complex subunit SAP18
KO
K14324
histone deacetylase complex subunit SAP18
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03013
Nucleocytoplasmic transport
bvg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104892377
03015 mRNA surveillance pathway
104892377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvg03019
]
104892377
03036 Chromosome and associated proteins [BR:
bvg03036
]
104892377
Messenger RNA biogenesis [BR:
bvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104892377
Chromosome and associated proteins [BR:
bvg03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
104892377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP18
PLCB1-4-like_EFh
Motif
Other DBs
NCBI-GeneID:
104892377
NCBI-ProteinID:
XP_010676598
LinkDB
All DBs
Position
5:4801546..4806982
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AA seq
172 aa
AA seq
DB search
MDRKRSREERERVGGGVAEPPPRSSGRPLPPPPPLPSRGLPGPPPLRARFQPVDREKTCP
LLLRVFTKTGGHHTQEDFSVRGKEPKDEVQIYTWMDATLRELTDLVKEVSPAARRRDAKL
SFAVVYPDKNGRMQVKKVGETFSNANKRRLDDNKALSEIYFQIGDYLDVSIE
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggacagaaaaaggagcagagaggagagagaaagagtaggcggaggcgtcgccgaacca
ccgcccagatcctccggtcgccctcttccgccgcctccccctcttccatcgcgaggccta
cctggtccccctcctcttcgtgcgcgcttccagcccgtcgatcgtgaaaagacttgtcca
ttgttgcttcgggttttcaccaagactggaggtcaccatacccaagaagatttttcagtg
agaggcaaggagcccaaggatgaggtccaaatatatacatggatggatgctactcttcga
gagttgactgatcttgtgaaggaagtatctccagctgccagaagacgagatgcgaaattg
tcttttgcagttgtatatcctgataaaaatgggcgcatgcaagtaaagaaggtaggtgaa
accttctcaaatgcaaataaaagacggttagatgacaacaaggccttgtctgagatatac
ttccagattggagattacttggatgtgtcaattgagtag
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