Beta vulgaris (sugar beet): 104892410
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Entry
104892410 CDS
T03548
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 8
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
104892410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bvg04040
]
104892410
Ion channels [BR:
bvg04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
104892410
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Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
104892410
NCBI-ProteinID:
XP_010676638
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Position
5:complement(5257440..5263004)
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AA seq
741 aa
AA seq
DB search
MSAYKSQVIGGQREKFVRLNKMDSFSAATPATKKFTFNINTIKRTVYGAQNPAKSFHIGM
MGSQGLKTIGKLKSGVTRAVFPEDLKVSDRKVFDPQDKSLLLWNRLFVISCIIAVSIDPL
FFYLPIVEHHKDCLGMDYGLAITTTSLRTMVDAFYLIHMAFQFRTAYIAPSSRVFGRGEL
VIDTGEIAKRYLLRYFIIDLLAVLPLPQIVVLKYLVKARGKGIMETKKWLQIIVFAQYIF
RFARFYPLTSDLKKTAGVFAESAWLGAAYYLLWYLLSSHIAGALWYLFAVERIDTCWRNA
CRSQGDKCKEDFLYCGNHDLESYETWRNISVEVLGKVCSVDEEVSSFNFGIYTQAQSSKI
VESQTFVNKFCYCLWWGLQNLSTLGQGLQTSTYPGEIIFSICLAISGLILFALLIGNMQT
YLQSLTVRLEEMRIKRRDSEQWMHHRLLPQVLRERVRRYNQYKWLETRGVDEEGLVQSLP
KDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTEQTFIVREGDPVDEMIF
IIRGHLESVTTDGGRSGFYNRGLLKEGDFCGEELLTWALDPKSAINLPLSTRTVKALTEV
EAFALRAEELKFVAGQFRRLHSKQVQHTFRFYSQQWRTWAACFIQAAWRRHMRRKIAELR
RLEEGEEEEEDFDDDSSGEIRRLIRPRHASSDGGGSSLATTMYVSRFARKALRGVYRLRS
GSSTTGLSLQKPPEPDFSHID
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcttacaagtcacaggtcattggtggtcaaagagaaaagttcgtaaggctaaac
aaaatggattcgttctccgctgccacccctgcaacaaagaagttcacattcaacataaat
acaataaaacgtacagtttatggagctcagaatccagcaaagtcttttcacataggaatg
atgggatcccaaggccttaaaacaattggtaaattaaagtcaggtgttactcgagctgta
ttcccagaagatcttaaagtttctgacagaaaagtatttgatcctcaagataaatctctt
cttctttggaatagactctttgttatatcttgcattattgcagtttctatagatcctttg
ttcttttatcttcctatcgtcgaacatcacaaagattgcctaggaatggattatggatta
gctattacaacaacgagtttgcgtaccatggttgatgctttctatcttattcatatggct
ttccaatttcgtactgcgtatattgcaccgtcttctcgagtttttggacgaggggaactt
gtgattgatactggagagattgctaaacgttacttactacgttatttcatcattgatctt
ttagctgttctgcctttaccacagattgtggtgctgaaataccttgtcaaagcacgaggc
aaaggtataatggaaacaaagaagtggttgcaaataattgtgtttgctcaatacattttt
agatttgccaggttttatcccctaacgtctgacctgaaaaagactgccggtgtctttgcc
gaaagtgcttggcttggagctgcatactacttgttgtggtacttgctttctagtcatatt
gctggagcactatggtacttatttgctgtggaacgtatcgacacatgctggcgaaatgca
tgtcgaagtcaaggtgataaatgtaaagaagatttcttgtattgtggaaatcatgatttg
gaatcatatgaaacatggagaaatattagcgtggaagttcttggtaaggtgtgttcagta
gacgaagaagtttcttcattcaactttggaatatatacacaagcacaatcttctaaaatt
gttgaatctcaaactttcgtcaacaaattctgctactgcctttggtggggtttacaaaat
ctaagtacactaggtcaagggctacagactagtacttatcctggagagatcatcttttcc
atatgcctcgctatttctggtcttattcttttcgcgcttctaatcggaaacatgcagacg
tatcttcaatctctgactgttaggctcgaggaaatgagaataaagaggcgtgattcagag
caatggatgcatcatcgtttacttccacaagttcttagggagcgagttaggcgatataac
caatacaagtggttggaaacacgaggagtagatgaagagggcttggtccaaagtctacct
aaagaccttaggagggacatcaaacgccatctttgtttaaatctagtcagaagagtcccc
ctatttgcgaatatggatgagcggttgcttgatgccatatgtgagcgactgaagcctagc
ttatacaccgagcaaaccttcatcgttcgagaaggggaccctgtggatgaaatgatcttc
attataaggggacacctagagagtgtcactactgatggagggagaagtgggttttacaac
cgagggttattgaaggaaggagacttttgtggtgaagagcttttaacatgggctttagac
ccaaaatcagccattaacttgcctttatcaacaagaacagtaaaagcattaacagaagta
gaggcctttgctcttagagcagaagagttgaaattcgttgctggtcaatttagaagactt
cacagtaaacaagtgcagcatacttttcgtttttactctcagcaatggaggacttgggca
gcttgctttatccaagctgcttggagacgccacatgaggaggaaaatagctgagcttcga
cgtttagaagaaggcgaagaagaagaagaagattttgatgatgattcctcaggagagata
aggagattgattaggccgcgtcatgccagttctgatggtggtggctctagtcttgctact
actatgtatgtctccaggttcgctaggaaggctcttcgtggggtctatagacttcggagt
ggatctagcaccaccgggttgtcgctgcagaagcctccggaacccgacttttcccacatt
gattga
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