Beta vulgaris (sugar beet): 104892527
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Entry
104892527 CDS
T03548
Name
(RefSeq) transcription factor bHLH140
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104892527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvg03400
]
104892527
Enzymes [BR:
bvg01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
104892527
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
104892527
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
104892527
DNA repair and recombination proteins [BR:
bvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
104892527
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
104892527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
AAA_33
zf-C2HE
Macro
HIT
AAA_18
AAA
Zeta_toxin
ABC_tran
nSTAND3
Motif
Other DBs
NCBI-GeneID:
104892527
NCBI-ProteinID:
XP_010676789
LinkDB
All DBs
Position
5:complement(7069354..7075400)
Genome browser
AA seq
769 aa
AA seq
DB search
MENKMEIDNSNPKQEEEKGNGKILVVIMMGAPGSGKSTFCDLVMGASSRQWVRICQDNIN
NGKLGTKAKCLSNAVVALKDKKSIFIDRCNLDREQRAEFVKLGSPEVDVHAVVLDLPAKL
CISRSVKRTGHEGNLQGGKAAAVVNRMLQKKELPKLSEGFSRITICQTERDVEDAITTYS
RLNAQDTLPSGCFGQKSPDAKVQLGIMKFLKKADSPSLGPGPSETRSSPSSQSVKEIKAH
SEGSKPDCFRGASNEREQGDHMMVESVADIAASTNSADGSAFLDIAPTLAFPSISTADFQ
FDHEKASDIIVEKVEEYMSKIRNGRLVLVDLTHKSKILSLVKAKAARKNINPEKFFTFVG
DITCLYSKGGLRCNVIANAANWRLKPGGGGVNAAIFGAAGPCLEVATKERAKTLSPGKAA
VIPVPADSPLFIREGVTHVIHVLGPNMNPQRPNCLKDNYDEGCKILREAYSSLFEGFATI
LKTQAVYTKADIGKFYSEKSELRDHRTQRDDDASEKKMKRENVHGEERAKKYKGLKFEAG
SNTNLGNGKEQQKDSNRNIGASKAWGSWAHALHNIAMNPEKHKGDVLEITTDVVVLNDMY
PKAKKHVLVLARLDGLDCLSNVCQEHLQLLKKMHQVGMEWVEKFILEDESLIFRLGFHSI
PSMRQLHLHVISQDFTSQHLKNKKHWNSFNTEFFRDAVDVIEEVERFGNPSIQDESLLSK
ELRCHRCKSAHPNIPRLKSHVNNCQAPFPATLLQNGRLVQGPTRADANS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaaaatggaaatcgataattcaaaccctaaacaagaagaagagaaaggaaat
gggaagattttggtagtgataatgatgggtgcacctggtagtggtaagtccaccttctgt
gaccttgtcatgggcgcctcctctcgtcaatgggttcgaatttgccaggacaacattaat
aatggtaaattgggaactaaagctaaatgcttaagcaatgcagttgttgcgctgaaagac
aaaaaaagcatatttattgacagatgcaacttggatagagaacaacgtgccgagtttgtc
aagcttggcagccctgaagtggatgtacatgctgtggtgcttgatctgcctgctaagctc
tgcatttcacggtctgttaaacgtacaggacatgaaggaaatttgcagggtggaaaagct
gctgcagttgtaaacagaatgctacagaagaaggaattgccaaagctgagtgaaggattt
tctcgaataaccatttgccagacggaacgtgatgtagaagatgctattacaacatatagt
aggcttaatgcacaggatactcttccctcaggctgctttggccagaagagcccagatgct
aaggtccagcttggtataatgaagtttttgaaaaaggcagattctcctagtttaggccct
ggtccaagtgagacccggagttctccctctagtcaatcagtgaaagaaattaaagcccac
agtgaagggtcaaaacctgattgctttagaggtgccagtaatgaaagggagcagggagat
catatgatggtggagtctgttgctgacatcgctgcttcgacaaactccgctgatggttct
gctttcttggacatagctcctaccctagctttcccttcaatttcaacagcagactttcag
ttcgaccacgagaaggcttctgatattattgttgagaaagtagaggaatatatgagtaag
ataaggaacggtagacttgttttggtggatttgactcataaatcaaagatcttatcttta
gttaaggctaaagctgcaagaaaaaacatcaatcctgaaaagttcttcacatttgtggga
gacattacttgtttatatagtaaaggaggcttacgctgcaatgtaattgccaatgctgct
aattggcgactaaaacctggaggtgggggtgtgaatgctgccatatttggtgctgcgggc
ccatgtctagaggttgcaaccaaagaaagggccaaaacgctttctccaggaaaggccgca
gtcatacctgtccctgctgattcacctttgtttattagagaaggagtcacgcatgtaatt
catgttcttggacctaatatgaatcctcaaagaccaaactgtttaaaagataactacgat
gaaggctgtaaaatcctccgtgaggcttactcatcactttttgagggttttgcaaccatc
cttaagacccaagcagtgtataccaaagcagacattggaaaattctattcagagaagtct
gaattgcgggaccacagaacgcagagagatgatgatgcttctgagaagaagatgaagaga
gagaatgtacatggcgaagaaagagctaagaagtacaagggactaaagtttgaagctgga
tctaacaccaatctggggaacgggaaggagcagcaaaaagattcaaatagaaatattggt
gcttctaaagcttggggatcctgggctcatgctttacataatattgcaatgaatcctgag
aagcataagggggacgtgctagagataaccactgatgtcgttgtactgaatgatatgtat
ccaaaggcaaaaaagcacgttcttgtgcttgcacgtttggatggtctggattgcctcagc
aatgtgtgccaagagcaccttcagttattaaaaaaaatgcaccaagtaggcatggaatgg
gttgaaaagttcatactggaagatgaatcgctgattttccgccttggttttcattcgatt
ccatcaatgagacagttgcaccttcatgtcatcagccaggacttcacctcgcagcatttg
aagaacaagaagcattggaactccttcaacacagaattcttccgagatgcagttgatgtc
attgaggaagttgagagatttggtaatccatcaatacaagacgagagccttctatcaaaa
gaactgcgatgccatcgttgtaagagtgctcaccctaatatacctcgtctgaaatcacac
gtaaacaattgccaagctcccttccctgccaccctacttcaaaacggtcgtcttgtccaa
ggaccaactagagcagatgcaaactcgtaa
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