Beta vulgaris (sugar beet): 104893066
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Entry
104893066 CDS
T03548
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03030
DNA replication
bvg03420
Nucleotide excision repair
bvg03430
Mismatch repair
bvg03440
Homologous recombination
bvg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104893066
03420 Nucleotide excision repair
104893066
03430 Mismatch repair
104893066
03440 Homologous recombination
104893066
03460 Fanconi anemia pathway
104893066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bvg03000
]
104893066
03032 DNA replication proteins [BR:
bvg03032
]
104893066
03400 DNA repair and recombination proteins [BR:
bvg03400
]
104893066
Transcription factors [BR:
bvg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104893066
DNA replication proteins [BR:
bvg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
104893066
DNA repair and recombination proteins [BR:
bvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
104893066
MMR (mismatch excision repair)
104893066
DSBR (double strand breaks repair)
HR (homologous recombination)
104893066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
zf-CCHC
CDC24_OB3
RADX
Ribosomal_S8e
Motif
Other DBs
NCBI-GeneID:
104893066
NCBI-ProteinID:
XP_010677435
LinkDB
All DBs
Position
5:16953570..16958442
Genome browser
AA seq
862 aa
AA seq
DB search
MAINLTEGAIEAMCNGDTDLKPVLQVADIRLVNTQNPSSATERYRLLLSDGLHLQQGMLA
TQRNELVKSGTLQKGSIIRLMQAVCNVIQGRTIIIMIELEVIQETFPTIGEPKQYVTGGA
RSAAQVPSSLGQSGIVPGNAQLANPHPPPAPRPSGVGSVLPQRAAQIQSYGGSASNSVAG
HYNTTNGSTLHPKPEFAVGNSANAAAASPYGAFNNAKTDYSRVPPNAYARNQQPAYQQPP
SMYMNRGPIAKNDGPPRIVPIAALNPYQGRWTIKARVTAKSDLRHYSNPRGDGKVFSFDL
LDSDGGEIRVTCFNAVVDQFYSLIEVGKVYLISKGTLKLAQKNFNHLPNDHEIFLDTTSV
VQPCFEDDSKIPRQQFHFQPISDIEGLENNAIVDVIGVVSSISPSSSIMRKNGTETQKRS
LQLKDMSGRSVEFTLWGNYCNTEGQTLQNMCDSGNFPVLAVKSARVSEFNGKNVGTFFTS
QLFIEPDFPEAQRLKEWFDREGKNMPSVSISRETTSLARTDARKTISQIKDEKLGTSEKP
DWITVCATISFIKVDSFCYTACPILVGDRPCSKKVTNNGDGKWRCDKCDQSVDECEYRYV
LQIQIQDHTAVTWATAFQEVGEEIMGISAKNLYYLKNEEQDEEKFMEIARAAIFNKYIFK
LKVKEETFSDEQRVKSTVVKSERVNFTAESRFLLESMDKLKVGDPGSLAAKPENPNIGIG
RSGVSHVGISQPASGVSYGTNSGIPGREPGKFNNNTSQFGNQYSGGYVGSSASGMPVTCS
SCGGTGHSATNCPSIINGPGGYVNQTVAAGSGSNSGQCYKCQEFGHFARDCPGLSAVPPA
YGGSNIGPGRYGGGQRQQVGGF
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggcgataaatctaacagaaggagcaatcgaagcgatgtgcaatggcgatactgacctg
aaaccagtgcttcaagttgctgatattcgtctagttaacactcaaaaccctagcagtgcg
accgagagataccggcttttgttatctgacggtctgcatttacaacaggggatgctcgca
actcagcgtaatgaactcgttaaatctggtacgttgcagaagggttccatcattcgtttg
atgcaagccgtttgtaatgtcattcaaggccgcacaattataattatgattgagcttgaa
gtgatacaagagacattccctacaattggagaaccaaagcaatatgtgactggtggtgct
agatctgctgctcaagtgccctcttctctgggtcaaagtgggatagttcctggcaatgct
cagctcgcaaatcctcatccaccacctgctccaagacctagtggtgtagggagtgttcta
ccgcaacgtgctgctcaaattcagtcttatggtggttctgctagcaattcagtcgcagga
cattacaatacgactaatggatctactttgcaccctaaaccagaatttgctgttggtaac
tctgcaaatgctgctgcggccagtccatatggagcattcaataatgcaaagacggactac
tctcgtgttcctccaaatgcttatgcacgcaatcagcaacctgcctatcagcagcctcct
tcaatgtacatgaatagaggtcctattgctaagaatgatggccctccaagaattgttcca
attgctgccttgaatccctaccaaggtcgatggacaatcaaggcaagagtaacagcaaag
agtgaccttaggcactatagcaatccacgtggggatgggaaagtattttccttcgatctt
ttagattctgatggtggggaaattcgagtaacctgctttaatgctgttgttgatcagttc
tacagcctaattgaggttggcaaagtatatttgatatcgaaaggaaccttgaaacttgct
caaaagaatttcaatcatcttcctaatgatcatgagatcttcttggataccacatctgtt
gtacaaccttgttttgaagatgacagcaaaattcctaggcagcaatttcacttccagcct
attagtgacattgagggcttagagaataatgctattgtggatgtgatcggtgtagtctct
tcaatcagtccgtcatcctcaattatgaggaaaaatggaactgaaactcagaaaaggagt
cttcaattgaaggatatgtctgggagaagtgttgaatttaccttgtggggaaattattgt
aatacagaaggacagaccttgcagaatatgtgcgacagtggaaactttcctgttttagct
gtcaaatcagctagagtatctgaattcaatgggaagaatgtgggaacttttttcacaagt
cagctatttatagaacccgatttcccagaggctcagaggttaaaggaatggtttgacagg
gaaggaaagaacatgccttctgtttccatttcaagagagacgacaagtttggcaaggacc
gatgctcgtaagactatatcacaaattaaagatgagaagttgggaacctctgagaagcct
gattggattacagtttgtgccaccatatcttttattaaggtggactccttctgctacaca
gcatgcccgattttggtcggggatcgtccatgcagcaaaaaagttacaaacaatggagat
gggaagtggcggtgtgataaatgtgatcagtctgttgatgaatgcgagtatagatacgtt
cttcagattcaaattcaggatcatactgctgtaacctgggcaacggcatttcaagaagtt
ggtgaagagattatgggcatctctgctaaaaatttgtactatttaaaaaatgaagaacaa
gatgaagagaagtttatggaaattgctcgtgcagctattttcaataaatacatattcaag
ttgaaagttaaggaagagactttcagtgatgagcagcgagttaagtcaacagtggtgaaa
tcagagagggtaaactttacagctgaatccaggtttcttttggaatcaatggacaaactc
aaggtaggtgatcctggctccctagctgcaaaaccagaaaatcccaatattggaataggt
agatcaggagttagtcatgttggaatcagtcagcctgcatcaggtgtaagctatggaaca
aattcgggaattcctggtagagaaccaggcaagtttaataacaacacaagccagtttggg
aatcagtatagtggtggatatgtgggctcttctgcttcaggaatgcctgtgacttgtagt
agctgtggtggtactggtcatagtgcaacaaattgcccaagtatcattaacggtccagga
ggctatgtaaatcaaacagtagccgctggtagtggtagcaattctggacagtgctataaa
tgccaagagtttgggcattttgcaagggactgtcctggattaagtgctgttcctccagct
tatggtggtagtaatatcggtcctggtagatatggtggtggtcaaagacaacaggtcgga
ggcttctaa
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