Beta vulgaris (sugar beet): 104893415
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Entry
104893415 CDS
T03548
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
104893415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bvg04040
]
104893415
Ion channels [BR:
bvg04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
104893415
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Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
104893415
NCBI-ProteinID:
XP_010677822
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Position
5:25043363..25064122
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AA seq
733 aa
AA seq
DB search
MMFDCGYGQKDKFVRLDDLDSTVSQSPDYTAVNKCRFGIEGLNCANTNYAINTPSNSFKR
ARMKGSEGLRSIGRSLRFGVSRAVFPEDLKVSEKKIFDPQDKFLQLWNKLFVVSCILSIS
VDPFFFYLPIVNPKLNCLGIDRKLAIAATTVRTIIDVFYLIRMALQFRTAYIAPSSRVFG
RGELVIDPAQIAKRYLLGYFFVDFLAVLPLPQIVIWRYLQRMKGSDVYATKQALLFIVLI
QYIPRIVRIIPLFSELKRTSGVFAETAWAGAAYYLLLYMLCSHMVGALWYLLGMERNDAC
WQNVCSDNKGNCTTNFLYCDNQQSPGYEIWSNMSVSLFNTTCSGSEDNDEFDFGIFGQAL
TSGIFSSSSFISKYCYCLWWGLQNLSTLGQGLQTSTYPGEVIFSIALAIFGLILFALLIG
NMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQELRERVRRYDQYKWLETRGVDEENLV
RSLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPSLYTEKTYILREGDPVD
EMLFIIRGRLESETTDGGRSGFLNRSFLKEGDFCGDELLTWALDPKSGSNLPSSTRTVRA
ITEVEAFALEAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAARFIQAAWRRYLKRKL
MEQQRRKEEEEAEASLKSGGSGGGTYSLGATILASRFAANALRGVHRNRLSRGTSVLVKP
PKPPEPDFSADAD
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcgattgtggttatggtcagaaggacaagtttgtcaggttggatgacttggat
tctacagtgtcacaatctcctgattacactgcagtgaacaagtgccgattcggtattgag
gggcttaattgtgctaatactaattatgctattaataccccatctaattcctttaagaga
gcaagaatgaaaggttctgaaggacttcgttcaattggcagatcacttagatttggggtt
tctcgtgcagtgtttcctgaggatttaaaagtctctgagaaaaagatttttgatccacaa
gacaaatttctacaactttggaataaactatttgtggtatcatgtattttgtccatttct
gtggatccttttttcttttatcttccaattgtcaatccgaagttaaactgtctggggata
gaccggaagttagcaattgcagccactacagtacgcacaataatagatgttttttacctc
atccgcatggctcttcagtttcgaactgcatatattgctccatcatctcgagtgtttgga
cggggtgaacttgtcattgatcctgctcagattgcaaagcgataccttctgggatacttt
tttgttgattttcttgctgtgctgcccttaccacagattgttatctggaggtatctacag
aggatgaaaggctctgatgtatatgcaaccaaacaggccttgcttttcatagtcttgatt
cagtatatccccagaattgtcagaattattcctctcttttctgaactaaaaaggacgtca
ggtgtctttgcggaaactgcgtgggctggtgcagcatactatctacttctctatatgctc
tgtagccatatggtaggggctttatggtatcttctaggtatggagcgtaatgatgcttgt
tggcagaatgtctgttccgacaacaagggaaattgcactacaaatttcttgtattgtgac
aatcagcaatcaccaggctatgaaatctggagcaatatgagtgtttcactttttaatacc
acttgctctgggagtgaagataatgatgagttcgactttgggatctttggacaggctttg
acatctggcattttctcatcaagtagctttatatctaagtactgttactgcttatggtgg
gggctacaaaacttaagtacattgggacagggacttcaaaccagtacctatccgggagag
gtgatattttccatcgcgcttgccatatttgggcttatcctgtttgcacttttgattggt
aatatgcagacttatcttcaatcacttacaattcgacttgaagagatgagggtcaaaagg
cgtgattcagagcaatggatgcaccatcgcctgctgccgcaggaactgagagaacgtgtt
agacgttatgatcaatacaaatggctagaaacacgtggagttgatgaagagaacttggtc
aggagtttacccaaggatctgagaagggacataaagcgccatctctgtcttgcattagtg
aggagggtccccttgtttgaaaatatggacgagaggctgctggatgctatatgtgagcgt
ttgaagccaagcttatacactgaaaaaacttacatccttcgggaaggtgacccagttgat
gaaatgctcttcattattcgtggtcgccttgagagtgagaccacagatggtgggcgaagt
ggatttttgaaccgcagtttcctaaaagagggtgatttttgtggagatgagcttttaaca
tgggcattagatcccaaatcaggttctaacctcccatcatctactcgaacagtgagagcc
atcacagaagttgaagcctttgcccttgaagctgaggagctcaaatttgtggcgagtcaa
tttaggcgccttcacagtagacaagttcaacataccttcaggttctactcacagcaatgg
agaacatgggctgctcgcttcattcaagctgcttggcgccgttatttgaagaggaaattg
atggagcagcagcgccgcaaggaggaggaagaagctgaagcatcattgaagagtggtgga
agtggtggtggtacatacagcctcggagccaccattctggcatcgagatttgcagctaat
gcccttcgtggggtccaccggaatcggctttccaggggtactagtgttttagtaaaaccg
cctaaaccaccagagcctgacttttcagcggatgcagactaa
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