Beta vulgaris (sugar beet): 104893672
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Entry
104893672 CDS
T03548
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bvg03016
]
104893672
Enzymes [BR:
bvg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
104893672
Transfer RNA biogenesis [BR:
bvg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
104893672
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Gene cluster
GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
Motif
Other DBs
NCBI-GeneID:
104893672
NCBI-ProteinID:
XP_010678101
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Position
5:33017517..33058672
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AA seq
798 aa
AA seq
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MMLGVRTVHSSCIIRSSANSSHSLSSFFCSFHQYRPTHSRTPSKLGFLPSKCRFELHFNG
YGGKLGVSDGHSLVDSVLKELHERRRTMRVQFSNKLESTSNGELLKDKLEKQELRGGLLL
EFKKDTERVLLAVVQKPDGKKNWMVSDQNGTTCSIKPQQITYVVPGVENFEHTQIPEFIQ
KAQDNLDASLLELAWAELLEKNNSVTPKELAEIIYGTSEPLESYCAHLLLSKDEIYFSMM
ETKGYCSVYAPRPIDQVEELLRRRLAKETAEKELQEFIQLLSSAKARPMDAKLSRSSWIL
EERIRDCVEALAAYAVDTCCTEIQKRTVGTILTAMGLAKSSSSAFNLLIDIGYFPVHVNL
DLLKLNIRTNHSDDIVSAAEDLLSVSFDIDEIRRIDLTHLKVYAIDVDEADELDDALSAA
RLQDGRIKIWIHVADATCLVQPGSTLDKEAMSRGTSVFLPTATYPMFPEKLAMEGMSLKQ
GKKCNAVTVSVVLHPDGSIAEYSVENTFIRPTYMLTYESASELLHLSLEEEAELKILSEA
AALRLHWRRQQGAVDTSMIETRVKVENPDDPEPRINLYVENQADPAMRLVSEMMILCGEV
IATFGSCNNINLPYRGQPQSNIDVSAFSHLPEGPARSCAIVKIMRAAEYDFRKPIRHGIL
GIPGYVQFTSPIRRYMDLLAHYQVKAFIRGDSPPFSAGQLEGIASIVNMQQRVARKLYNS
SLRYWILEYLRRQPRERKFRALILRFIKDRIAALILVEVGLQASAWVTVGSQVGDEIEVR
VEDAHPRADNLSLKQVAQ
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgggggttcgtactgtccatagctcttgtatcattcgctcatctgccaattct
tctcattctctctcttctttcttctgctctttccatcaatatcgacctacacattcaagg
acaccttctaaattaggatttctaccttctaagtgtcgcttcgagcttcatttcaatggt
tatggaggaaaactcggagtttctgatggtcacagtttagttgacagtgtcttgaaggag
cttcacgaaagacgtaggacgatgagggttcaattctctaacaagctggaatcgacaagc
aatggggagcttcttaaagacaagcttgaaaagcaggaacttcgaggaggtttgctgttg
gaattcaaaaaggatactgagagggtattgctagcagttgttcaaaaacctgatggaaag
aagaactggatggtgtctgatcagaatggtacgacatgctcgataaaaccacaacaaata
acttatgttgttcccggtgttgagaattttgagcatacccaaattccagagtttattcag
aaagctcaggataacttggatgcatctctgcttgagcttgcttgggctgagctgcttgag
aagaataactcagtgactccaaaggagttggcggagattatttatggtacttctgaacct
cttgagagctattgtgcacatctcctgctctcaaaggatgagatctacttctccatgatg
gagactaaaggttattgttctgtgtatgctcctcgacctattgatcaggtcgaggaactt
ctgaggaggagacttgccaaggagactgctgagaaagaacttcaggagttcatacagtta
ttatcatctgctaaggcaagacctatggatgcaaagctttccagatcctcatggattctg
gaagagaggattcgtgattgtgttgaagctcttgctgcttatgcagttgatacatgctgc
actgagatccaaaagagaacagttggaacgattcttacagccatggggttggctaaatca
tcatcatcggcgtttaatcttctcattgatattggttattttccagtgcatgtcaatctt
gatctgttgaagctaaacattcgcaccaatcactcagatgatattgtgtcggctgctgaa
gatttgctgtcagtgtcttttgatatagatgagatccggaggatagatcttactcacttg
aaggtctacgctattgatgttgatgaagctgatgagcttgatgatgcacttagtgcagca
agattgcaagacggtcggatcaaaatctggatacacgtggcggatgcaacctgcttagtt
caacctggaagcactctggacaaagaggccatgagcagaggaactagtgtttttttgcct
acagcaacttatcctatgtttccagagaagcttgcaatggaaggaatgagcttaaaacaa
ggaaaaaagtgcaatgctgtgactgtatctgttgtactgcatcctgatggcagcattgct
gagtattctgtagagaatacctttatcaggcctacctacatgcttacttatgaaagtgca
tcagagctccttcatttgagtcttgaagaggaggctgagttaaagattctatctgaggct
gcagctctacgtttacattggcgtagacagcagggcgctgttgacacctcaatgatagaa
acacgtgtcaaagtggaaaatcctgatgatccagaaccacggattaatctttatgtagag
aatcaagcggaccctgcaatgcgccttgtttcagagatgatgattctttgtggagaggtt
attgctacatttgggtcttgcaacaacattaatttaccttatagaggacagccacaatca
aatatagatgtatccgcattttctcatcttcccgaaggaccagctcgaagttgtgctata
gttaaaataatgcgtgcagccgaatatgatttccgcaagccaatacgccatggtattttg
ggaattcctggttatgttcagttcacatccccgatacgtagatatatggatcttcttgcc
cattatcaggtaaaagcttttattaggggtgattcccctccattttcagcaggtcagcta
gaaggcattgcatcgatagtgaatatgcagcagagagttgcaagaaagctgtacaatagt
agtcttcggtattggattttagaatatttgagaaggcagccaagggaaagaaagttccgt
gctttgatactcagatttattaaggaccgcatcgcagccttgattttggtggaggtcggg
cttcaagcttctgcatgggtcacagtgggatcccaggttggagatgaaatcgaagttcgg
gtagaagatgctcatccaagagctgataatttatccctcaagcaggtagcgcaatag
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