Beta vulgaris (sugar beet): 104893770
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Entry
104893770 CDS
T03548
Name
(RefSeq) cleavage stimulation factor subunit 77
KO
K14408
cleavage stimulation factor subunit 3
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104893770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvg03019
]
104893770
Messenger RNA biogenesis [BR:
bvg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
104893770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
TPR_15
TPR_2
TPR_16
TPR_CcmH_CycH
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
104893770
NCBI-ProteinID:
XP_010678208
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Position
5:complement(36061354..36102519)
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AA seq
747 aa
AA seq
DB search
MAEIIDNNYNVEAAEILANEASHLPITEAAPIYEQLLAIYPTAAKFWKQYVEVQMAVNND
DATKQIFSRCLLNCLQVPLWRCYIRFIKKVNEKKGFDGQEETRKAFDFMLNYVGADIASG
PVWMEYISFLKSIPARSAQDETQRMTAVRKAYQKAIVTPNHHVEQLWKDYENFENSVSRV
LAKGLISEYQPKFNSARAVYRERKKYADEIDWNMLAVPPTGSCKEEQQWMTWKKLLAFEK
GNPQRIDSASSNKRIVFAYEQCLMYLYHYPDVWYDYATWHAKSGSVDSAVKVYQRALKAL
PDSEMLKYAYAELEESRGAVQLAKKIYESLLGDGVNATALSHIQFIRFLRRTEGVEAARK
YFLDVRKSPHCTYHVYVAYAMMAFCLDKDPKVAHNIFEAGLKRFMHEPGYILEYADFLSR
LNDDRNIRALFERALNSLPPEESVEVWKQFAQFEQTYGDLASMLKVEQRRKEALSRTSDD
GGVAQEGSLQEVISRYSFMDLWPCSSKDLDHLARQAWLANNMNTKVEKTSVPNGAGSIVE
EKSTSGVTTMLEQSSKVVNPDLTQMVTYEPGQKLGSTVPPSGMAGGFPAAATTMSTFDGI
LKAAPPALVAFLANLPAVEGPAPDVDFVLSICLQSNPVTGHASKHVLSAAQVPAGAVSGM
SEPSGSHKARPAPSGSSVRMSRDRQSGKRKDAARQEDDETASVQSVPLPKDAFRIRQLQK
ARGGTVSQTGSTSYGSAFSGEQSGSTS
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggctgagattatcgataataattacaatgtcgaagctgctgagattttggctaatgag
gcatcgcatctgccaatcactgaagcagctcctatatatgaacaacttctggccatatac
cctactgctgcaaaattttggaagcagtatgtggaggtacaaatggctgttaataatgat
gatgctacaaaacaaatctttagtcgttgtttgttgaactgccttcaagttcctctttgg
aggtgctacatccgttttattaagaaggtcaacgagaagaagggctttgatggtcaagaa
gagacaaggaaagcctttgattttatgctaaattatgtgggagctgatattgcatctggt
cctgtatggatggagtacatcagcttcttgaagtccataccggcacgttcagcacaggac
gagactcagcgaatgactgctgttcgcaaggcatatcaaaaagctattgttactccaaat
caccatgttgaacaactatggaaggattatgaaaattttgaaaattctgttagccgcgtg
ctggctaaagggcttatatcggagtatcaaccaaagtttaacagtgcgagagctgtctat
agagagcggaagaaatacgctgatgaaattgattggaacatgttagccgtcccgccaact
ggttcctgcaaggaagaacagcaatggatgacatggaaaaaacttttggcgtttgaaaaa
ggaaatccgcaaaggattgacagcgcatcttctaataagagaattgtctttgcctatgaa
cagtgtctgatgtatttatatcattatcctgatgtatggtatgactatgctacatggcat
gcaaaaagtggttctgtagattctgctgtcaaagtttatcagagagctttgaaggctctt
ccagattctgagatgctgaagtatgcttatgctgaactggaggaatcccgtggagcagtc
cagcttgcaaagaagatttatgagagcctgttgggtgatggcgtgaatgcaacagcactt
tcacatatacaatttattaggttccttagaagaactgaaggagtggaagctgcccgcaaa
tactttctggatgttcgcaaatcaccacattgcacttatcatgtttatgttgcatatgct
atgatggctttttgtcttgacaaggatcctaaggttgctcataatatttttgaagcagga
ttaaaacgtttcatgcatgagcctggatacatccttgaatatgcagattttttgtcacgt
ttaaatgatgatcgaaacatcagagctttgttcgaacgtgcactcaactcgcttccaccc
gaagaatctgttgaggtttggaagcagtttgcgcaatttgagcaaacatatggagacctt
gctagcatgctgaaggttgagcaaagaaggaaagaggcactttccaggacaagtgatgat
ggaggtgtagcacaagagggttcactacaggaagtaatttcacgatacagtttcatggat
ctttggccatgttcatccaaggatctggatcatctagcacggcaagcgtggcttgctaat
aacatgaacacaaaagtggaaaagactagcgtaccaaatggagcaggttccatagttgaa
gagaagagtacttcaggagttaccacaatgttggaacaatcctcaaaagtggttaatcca
gatcttactcagatggtgacatatgaaccggggcagaaattagggtctacagttcctcct
agcggaatggcaggtggttttcctgctgccgctactaccatgtcaacatttgatgggatt
ttgaaagcagctcctcctgcacttgtagcttttttagcaaatcttcctgccgtagaaggt
ccagcaccagatgtagattttgtgctgtccatatgtctgcaaagcaaccctgtgacaggg
catgcgtcgaagcatgtgctctcagcagcgcaagtacctgcaggagcagtgtctggtatg
agcgagccttctggttcacacaaagcccgccctgctcctagtggctcatctgtgagaatg
tcaagagatagacaatctggaaagaggaaagatgcagcgagacaagaagatgatgaaact
gcatcagtgcagagcgttccccttcctaaagatgccttcagaatacgccaattgcagaaa
gctcgtggaggaacggtctcacaaacgggatcaacatcttatggaagtgccttttctgga
gaacagtctggcagcactagctga
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