Beta vulgaris (sugar beet): 104893975
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Entry
104893975 CDS
T03548
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104893975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bvg03009
]
104893975
Ribosome biogenesis [BR:
bvg03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104893975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WDR55
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
104893975
NCBI-ProteinID:
XP_010678421
LinkDB
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Position
5:41130438..41133874
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AA seq
570 aa
AA seq
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MSLISQNAVIKDKSRKKKKSKRNDNEGEEPFLLEDKEEILEEEGLDVDDIVSHKKRIKRN
EAEVKQMMEEEMEMQNLGNFLFGSLHSPVEFGKEDEDEKQGGVDMDASPLFIMDRSGNND
LSAYGEDGGYQGGNVDEDGGEQRKPVWLDDEEEETAINISKVNRLRKLRKEEDETVISGS
AYVSRLRAHHEKLNPGTGWANLDSKAGMYDSDEDSEVENGAVVASGYKRVDDILKTNEEL
VMKRGVKLLPGILEYSKLVDANVEDPSNGPINSVQFHRNHQLLLAAGLDRKLRFFQIDGK
RNKMMDSIFIEDCPIRNASFLPDGSQVIVAGRRKFFYSIDISKGNVDKIGPLTGREEKSL
EVFEVSPDSRTIAFLGNDGYILLVSAKTKELIGTLKMNGTARSIAFTDDGQQLLSSGGDG
QVYHWDLRTRTCLHKGVDEGSINGTALCTSPVGNLFAAGSSSGIVNVYNREEFLGGKRKP
IKTLEHLRTEASFMKFNHDAQILAICSRMQKGSLKLVHVPSFTVFSNFPPANKTLNFPRS
LDFSPAGGFMAMGNAAGKVLLYKLHHYQQA
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgatttctcaaaatgctgttattaaggataaaagtaggaagaaaaagaagtcg
aagcgaaatgataatgagggtgaggagcctttcttgttagaagacaaggaggagattttg
gaggaagagggtttggatgttgatgatattgttagtcataagaaaagaattaaaaggaat
gaagcggaggtaaagcagatgatggaggaggaaatggaaatgcagaacttggggaatttt
ttgtttgggtctttgcattcgccggttgagtttggaaaggaagatgaggatgaaaaacaa
ggcggagtggatatggatgcctcgccgttatttatcatggaccggtctggcaataatgat
ttgtcggcttatggagaggatggaggttatcaagggggaaatgttgatgaagatggcggt
gaacaaaggaaaccggtttggttggatgacgaagaggaggagactgctattaacatttcg
aaggttaataggttgaggaagctaaggaaggaagaagatgagactgttatatcaggttct
gcatatgtgtcaaggttgagggctcatcatgagaagctgaaccctggcacaggttgggcc
aatcttgattcaaaggctggaatgtatgattctgatgaagattctgaggtagaaaatggg
gcggtggttgcttctggttataaaagggttgatgatattctaaaaacaaatgaagagctt
gtgatgaagagaggagtgaagcttttgcctggaatccttgagtactcgaaattagtggat
gcaaatgtagaagatccttctaatggcccaataaactctgtccagtttcacagaaatcat
cagttactccttgctgctggattagaccgaaagctgagatttttccagattgatggcaag
aggaataaaatgatggattccatcttcattgaagattgccctattagaaacgcatctttc
ttaccggatggctcacaagttattgttgctggtagaagaaagttcttctatagtatcgac
atatccaagggaaatgttgataaaattgggccactaactgggagagaggaaaaaagcttg
gaagtttttgaggtttccccagattctcgtactatagcctttttgggaaatgatggttac
attttgttggtatctgcaaaaacgaaggaactgattggcacccttaaaatgaatggaaca
gctcgatctatagctttcactgatgatggacagcaattgttgagttctggtggtgatggg
caagtctaccactgggatttaagaacaagaacttgtctccataagggcgtggatgaaggc
tctattaatggcactgctctttgtacttcaccagtagggaatctgtttgcagctggttca
tctagtggaattgttaatgtttacaacagggaggaattcttggggggaaagagaaaacca
atcaaaacacttgagcatctcagaacggaagcaagtttcatgaagtttaaccatgatgct
cagattttagccatctgttcaagaatgcagaagggcagcctaaaattggttcacgtccct
tcgtttactgtcttttctaattttcctccagcaaacaaaacactgaactttccgagaagt
ttggattttagtcctgctggtggtttcatggctatggggaatgcagctggaaaggttttg
ctgtataagttacatcattatcagcaagcataa
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