Beta vulgaris (sugar beet): 104894746
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Entry
104894746 CDS
T03548
Name
(RefSeq) BRCT domain-containing protein At4g02110
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104894746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvg03032
]
104894746
03400 DNA repair and recombination proteins [BR:
bvg03400
]
104894746
DNA replication proteins [BR:
bvg03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
104894746
DNA repair and recombination proteins [BR:
bvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
104894746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
PHD
RTT107_BRCT_5
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
104894746
NCBI-ProteinID:
XP_010679354
LinkDB
All DBs
Position
5:51345128..51353687
Genome browser
AA seq
1481 aa
AA seq
DB search
MMYGSPVFSGIRFFLSGFNSQNYLQVKSQLVSEGGVVLEEYGTDCTHVVVHDLVYDDPIC
VTARRDKKVLVTALWVGHSLDAGAPVDAANIMYRPLKELTGIPGANELLICLTGYQGADR
EDIMMMVRLMGAHFSKPLLANKVTHLICYKFEGEKYELAKKMNYAKLVNHLWLEDCLKAW
KILPEESYNISGYELEMMGAEAKDSEDETENFTGRNINGITNLPNDMGETHNQSVVTSKV
SVPSTHQGFSNNLIVNDGKSLQSDLLFESGERVHKGQYQMDANSHNADLQNIAFLSSNQI
ENGYPSTSGKAEISCDTDAEKFNSFKSSGMTEKKSSFQLHIGEGFGDTIKASPKRPLDSD
TGNRSPLNSRKTPRSRTPLQTAGKFGKSDERPGEKTAKKIIVDVPTFNLETDSEEAALVS
LELSSSKKITESDAVKHSTLKSKKYLRRSSLSKSAGKSSDADGKLKKGSAEKVVDVCTSN
VGPDQGKATSACAASSGEAGIIDGEVPGGLLPRKRTADGSTISHATPKSQKLATSASEKV
DAAEARTPVDSALEERKSDALSSGNHIGDEFTSPSAGRSFPNVSSAKSNAKNVASSSSLA
FEMLQGSKPLTADVLTSPIPNSVSTSPCVGNKKGQPQNLHQNVAASPGTNDIEAVKSGGP
ELKSGDQTGNSIAKPARKKMVARKTLGSRPKVSKRSADARKSSVSENPLQDETAIQSVAQ
QNKKELTPSPDTDKVLVLPITVDGPVGFSSKLHLEFGTEIFDGAEVSDDLTKAPPKLDVH
SKKPVIAEQSHKVESITGGASGGLLHQADGAEVTSDSDKTNEQGTFVVETVGVKGNLVPQ
KKGIAVKAKKKIAAKEAVKNADEIKGGEGSNRVKKQVVGVAAKKGRGTLLLEKSKRPVEV
GKENELVRNDRVELGSENELVCNDQHTNKVVKHSGKLASKKRRGTLLLNKSEGSVEAETE
NEQVFDGDGQNNVTSSLGDLTATSNMAQDYEEAKNKNDPCVLNDQGTSKVVKCPGKLTGK
KRRGTLMLKKPDSPDEAEKEIEPVVDGKQDHGKLAGVSGISGRSKETEKENDIPILGTNQ
GKIKGGKHAGNLAAKKRRGTLVLSKSEAQVDEEKKIKKVSDIDEDKSKGGILTEKLAKSN
LTANRSDVANSNSLDIQEVKKQPACFLLSGHRLQRKEFQQLIKRLKGKVCRDSHQWSYQA
SHFIVPDPIRRTEKFFAAAASGSWILKTDYLAASSQAGKFLPEEPYEWYKNGLSEDGAIS
LEAPRKWRLLRERTGHGAFYGMQIVIYGECIAPPLDTLKRVVKAGDGTILATSPPYTRFL
ESRVDFAIVSPGMPRVDIWIQEFLRHQIPCVLADYLVEYVCKPGYPLDRHVQYNTHEWAT
KSFSQLMSLSEEVITHAATPPDDQVSDDLACQVCGSTDRGEVMLICGNETGSIGCGTGTH
IDCCDPPLEDIPEEDWYCPTCTKSANKPPGSSKNKRSSSRK
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacggatctcctgttttttccggaattcgattctttctttctggattcaactct
caaaactacctccaggttaaatcgcagcttgtaagtgaaggaggagttgttcttgaagag
tacggaactgattgtactcacgttgttgtccacgacctcgtatatgatgatcctatatgt
gttactgcgagaagggacaagaaggtgcttgttacagctttatgggttggtcatagttta
gatgctggagcgccagttgatgctgccaatatcatgtataggccactgaaggagctcact
ggaattccgggtgctaacgagcttcttatctgtttgactggataccaaggggcggatagg
gaagacatcatgatgatggtgcgcttaatgggagcacatttttctaaaccactgttggcg
aacaaagtgactcatcttatatgctataagtttgaaggggaaaagtatgagctggctaag
aagatgaattatgcaaaactcgtgaatcatctatggttagaagattgtctgaaggcttgg
aaaattcttccagaggagtcctataatataagtggctatgaattggagatgatgggagct
gaggctaaagatagtgaagatgaaactgagaattttactggaagaaacattaatggaatc
actaatctgccaaatgatatgggagaaacccataatcaatcggtggtgacaagtaaagtg
tcagttccttccacacatcaaggattctcaaacaatctaattgttaatgatggaaagtcg
ctgcagtctgatttgttgtttgagtctggagaacgggttcataaaggtcagtatcagatg
gatgctaactctcataatgctgatttacagaatattgcatttctttcatctaatcagatc
gaaaatggctatccatctacttctggaaaggctgagatttcatgtgatactgacgctgag
aagttcaatagctttaaatcctcagggatgactgaaaagaaaagtagttttcaattgcat
atcggggagggctttggtgacacgattaaagcaagtcctaaaagaccacttgattctgat
actggaaacagaagtcctttgaactcgagaaaaactccgagatctaggactcccttgcaa
actgctggaaagtttggtaagtcggatgagaggccaggagaaaagacagctaaaaaaata
attgttgatgtgccaaccttcaacctagaaacagattcggaagaagctgctttagtgtct
cttgaactatcaagttccaagaaaataactgaatctgatgctgtcaagcatagtactttg
aagtcaaaaaaatacttaagaagatctagcctctcaaaatcagcaggaaagtcgagcgat
gcagatggaaaactgaaaaagggttcagctgagaaggttgtggatgtgtgcacctccaat
gtaggaccagaccagggaaaagctacttcagcatgtgcggcatcaagtggagaagctggt
ataattgatggggaagttccaggtggtttactgccacgaaagaggactgcagatggttca
actatttctcacgctactcccaaatctcagaagttggctacttcagctagtgaaaaagtt
gacgcagcagaagctagaaccccagtagatagtgctcttgaagaaagaaaaagtgatgct
cttagttctggcaaccatataggagatgagtttaccagtccgtctgctggtaggtcattt
cctaatgtttcatctgccaagtccaatgcaaagaatgttgcttcctctagttcattggct
tttgagatgctgcaaggcagtaagcccctaaccgcagatgtcctaaccagccctatccct
aacagtgtttctacttcaccgtgtgttggtaacaaaaaggggcaaccacagaatctgcac
caaaatgttgctgcttctcctggcaccaatgacatagaggctgtaaagtctggaggtcca
gagttgaaatctggtgatcaaactggtaactccattgcaaagccagcaaggaagaaaatg
gtggctcggaagactttgggttctagacctaaggtaagtaaaagaagtgccgatgctcga
aaaagttctgtcagtgaaaatcccttacaagatgaaacagccatacagtcagttgctcag
caaaataaaaaggagcttacaccttcacctgatactgataaagttctggtgctgcctatt
acagtagatgggcctgttggtttcagttctaagcttcacttggagtttggtactgaaatt
tttgatggtgctgaagtttcagatgatttaaccaaggctccacctaaactagacgtgcat
agtaagaagcctgtgatagctgaacagtcacataaagtggagtcaataacaggaggggca
tcgggtgggctgcttcatcaagcagatggagctgaagttacttcagattcagataagaca
aacgagcagggaacttttgtggttgaaactgttggtgtgaagggaaacttggtcccacag
aagaaagggattgctgttaaagctaagaaaaaaattgctgcaaaggaagctgtaaaaaat
gctgatgagattaaaggtggagaaggcagcaatagagtgaagaaacaagtagttggtgtt
gctgcaaagaaaggtcgtggtacacttttgttggaaaagtcaaagcggcctgttgaagta
ggaaaagaaaatgaacttgtccgtaatgaccgagttgaattgggaagtgaaaatgaactt
gtttgtaatgatcaacatacgaataaggttgtaaaacattcagggaagttagcttcgaag
aaaagacgcggaactctacttttaaacaagtcagagggttctgttgaagcagaaactgaa
aatgagcaagtttttgatggtgatggtcagaataacgtgacaagttccctcggggatctg
actgcgacttccaacatggcacaggattatgaggaagccaaaaacaaaaatgacccctgt
gttcttaatgaccaaggtacaagtaaggtggtaaaatgccctggtaagttaactgggaag
aaaaggcgtggcactctaatgttaaaaaagccagatagcccggatgaagctgaaaaggaa
attgagccggtagttgatggtaaacaagaccatgggaagctggctggtgtatctggcatc
tcagggaggtccaaggaaaccgaaaaagaaaatgatatccctattcttggtactaatcaa
gggaaaattaagggtggcaaacatgctggtaacttagctgcgaaaaagaggcgtggcact
ctagtgttaagtaagtctgaggcgcaggttgatgaggaaaagaaaattaagaaggtttct
gatattgatgaagataagagtaaaggtggaatactcactgagaagctggccaagtccaac
ctgactgctaataggagtgatgtagctaattcaaattccttagacattcaagaggtgaaa
aaacaaccagcatgctttttacttagtgggcatagattgcagagaaaggaattccaacaa
ctcattaagcgtcttaaaggtaaagtttgccgagattctcatcagtggtcatatcaggct
tcacatttcattgttccagatccaattcgcagaacagagaagttctttgctgctgcagca
tctgggagttggattttaaagactgattacttagcagcgagtagtcaggctgggaagttt
ttgcctgaggaaccatatgaatggtataagaatggccttagtgaagatggtgctattagt
cttgaggctccaagaaagtggcgccttctgagggagaggacaggtcatggtgccttctat
ggcatgcaaattgtcatctacggagaatgcattgctccacccttggataccttaaagcgc
gtagtgaaggctggagatgggacaatcttagcaacttctccaccttacacccgttttctt
gaatcaagggtggattttgcgattgttagtcctgggatgccacgcgttgatatatggatt
caagagttccttagacaccaaattccgtgtgtcttggctgattacttggtggagtatgtg
tgcaagcccgggtaccctcttgacagacatgttcaatacaacacccacgaatgggccact
aagtcattctcacagctcatgagcctgtcagaagaggtcataactcatgctgctacacca
ccagatgatcaggttagtgatgatctagcatgtcaagtttgtggctcaactgatagaggg
gaagtaatgttaatttgtggcaatgagactggttccattggttgtgggactggaactcac
attgattgttgcgatcctcctcttgaggatatcccagaagaagactggtattgtcccacg
tgtactaaatctgcgaataaaccgcctgggagtagcaagaataaaagatcttcaagtaga
aaatga
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integrated database retrieval system
