Beta vulgaris (sugar beet): 104894806
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Entry
104894806 CDS
T03548
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bvg03016
]
104894806
Enzymes [BR:
bvg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
104894806
Transfer RNA biogenesis [BR:
bvg03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104894806
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
Methyltransf_32
zf-U11-48K
Methyltransf_31
Methyltransf_25
Maf_flag10_N
Methyltransf_12
RrnaAD
Methyltransf_11
Motif
Other DBs
NCBI-GeneID:
104894806
NCBI-ProteinID:
XP_010679439
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Position
5:complement(52052767..52057042)
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AA seq
477 aa
AA seq
DB search
MDKIVKMNIIENHSAVVISNMEKRCQFWLPKKKRFCANTPLNPSSSFCGNHTTRSDANWV
PCSIDPSHCVLEDNMEAHLKKCPLLKQTQTLLVQPYYQQGINRGTDDDSADHPDFTSVLK
RNLVYSLTVPQFSDLLSKICSIHNSISKDIGFSYKVPPACHIWINRLISRKLPYQEKHVQ
QQASILGNLEEFGVLSSSTQALTEQQFDHTASRYCEDNISSVVEFGAGRGYLTQILADCY
GIRKVFLVERKSYKLKADRSLRQKENLALERLRIDIEDLNLNAVESLKGIPYLAIGKHLC
GPATDLTLRCCLGEQCDQDIGIEKSVRPQLRSTAVATCCHHLCQWKHYTGKKYLKNLGIT
KDGFHAITWFTSWAVDADHGSDLSDDGFLQSPLPPGDNDEYGGGGKEVEDIIRNMKAVDR
AALGFMCKDIIDMGRLMWMKECGLEAKLVKYVPSDISPENRLLIAKVAAPTISTPTS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggacaagattgtgaaaatgaatataattgaaaatcacagtgcagtggtaatatcaaac
atggagaaacgatgccaattttggctgccgaagaagaagagattctgcgccaacaccccc
ctcaatccctcatcctcattctgtgggaatcacaccacaaggtccgatgccaactgggtt
ccttgttcaatcgacccttcacattgtgtgcttgaagataacatggaggcacatcttaag
aaatgccctcttttgaaacaaacacagactttgttagtccagccttattaccaacagggc
atcaatcgaggtacagatgatgattctgcagaccaccccgattttacttctgtattgaag
aggaatctggtttattctttgacggttcctcagttttcggacctgctctccaagatctgc
tctattcacaattccatttctaaggatataggcttttcttataaggtgcctcctgcctgt
catatctggattaacaggctaattagtaggaaattgccgtaccaagagaagcatgtccag
caacaggcgtcaattcttggcaacttggaggaatttggggttctgagcagttctactcaa
gctttgacagaacaacagtttgatcatactgcatcacgttactgtgaagataatatctct
tctgttgttgagtttggagctggtaggggctatttgacacagatattagctgattgttat
gggatcagaaaggtcttcttggttgagcgtaagtcatacaagctgaaggctgatcgaagt
ttacgacagaaagagaacctggcattggagcgtttaagaattgacatcgaagacttgaat
ctgaatgctgtcgaatctttgaagggaataccttacttggcgattggtaaacatctatgt
ggacctgccacagatttgacccttagatgttgtcttggcgaacaatgtgatcaagatatt
gggatagaaaagagtgttcgtcctcaacttagaagcactgctgtggcaacctgttgccac
catctctgccaatggaaacactacacaggtaaaaagtacctaaagaacctaggaatcact
aaagacggtttccatgctattacttggtttaccagctgggcagtagatgctgatcatgga
tcagatctttctgatgatggttttttgcaatctccattgccaccaggtgataatgatgaa
tatggtggaggtggtaaagaagttgaagatattataaggaatatgaaagcagtggacagg
gcagcattgggattcatgtgcaaggatatcattgacatgggaaggttgatgtggatgaag
gaatgcggattagaagctaaacttgtcaagtatgtcccatcagacatttctcctgagaat
cgtttactgattgctaaggtagcagcaccaaccatatctacaccaacaagctaa
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