Beta vulgaris (sugar beet): 104895101
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Entry
104895101 CDS
T03548
Name
(RefSeq) ribosomal RNA small subunit methyltransferase nep-1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104895101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bvg03009
]
104895101
Enzymes [BR:
bvg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
104895101
Ribosome biogenesis [BR:
bvg03009
]
Eukaryotic type
90S particles
Other 90S particles
104895101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
104895101
NCBI-ProteinID:
XP_010679820
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All DBs
Position
6:complement(3097027..3101309)
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AA seq
275 aa
AA seq
DB search
MTRPFAVKAGKKRKKREENYDKEEVELVKEEIPAATADTIAEDEKIVEDLVQDMPGIPIT
VSNSTIRSRAVFILEKASLEVAKVGKSYQILNSEDHANFLRKHNKNPSDYRPDIIHQALL
MILDSPLNKAGKIQAVYVKTEKSVLFEVKPHVRIPRTYKRFAGIMLQLLQKLSISAAGKR
DKLFRVIKNPVTQYLPVDSRKIGFSYSSEKLVDIQKYVTAVKDDVNFVFVVGAMAHGKVD
DEYVEDYISISGYPMSAAWCIARICEGLQQKWSVL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgacaagaccatttgcagtgaaagctggtaagaaaaggaagaagagagaagaaaattat
gataaggaagaagttgaattggtgaaagaggaaataccagctgccacagctgatacaata
gctgaggatgaaaagatagtggaagatttggtgcaagatatgcctggcatccccattact
gtatcgaattcgacaatccgctcccgggctgttttcatccttgaaaaggcttcccttgag
gttgccaaagttggaaagagctaccaaattttgaactctgaggaccatgcaaattttctg
cggaaacacaataagaacccatccgattacagacctgacatcattcatcaggctctatta
atgattctggatagccccctaaataaggctggaaagatacaagctgtgtatgttaaaact
gaaaaaagtgtacttttcgaggttaaacctcatgttcgtatcccaagaacatacaagcgt
ttcgctggcattatgttgcaattgctacagaagctgagcatatccgcagctggcaaacgg
gacaagctttttcgtgttattaaaaatcctgtcactcagtacctacctgttgattctcgt
aagataggcttttcatacagctcagaaaaattggttgacattcaaaaatatgtgactgct
gttaaagacgacgtaaattttgtctttgtggttggtgctatggctcatggaaaggttgat
gatgagtatgttgaagactacatatcaatctcaggttatccgatgagtgctgcgtggtgt
atagcaagaatttgcgagggcttgcaacagaaatggagcgtcttgtga
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