Beta vulgaris (sugar beet): 104895202
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Entry
104895202 CDS
T03548
Name
(RefSeq) WD repeat-containing protein 82-B
KO
K14962
COMPASS component SWD2
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104895202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvg03019
]
104895202
03036 Chromosome and associated proteins [BR:
bvg03036
]
104895202
Messenger RNA biogenesis [BR:
bvg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104895202
Chromosome and associated proteins [BR:
bvg03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
104895202
COMPASS/SET1 complex (yeast)
104895202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_VPS8
KNTC1_N
VPS11_N
Beta-prop_WDR35_TULP_N
HisKA_2
Motif
Other DBs
NCBI-GeneID:
104895202
NCBI-ProteinID:
XP_010679944
LinkDB
All DBs
Position
6:complement(4336544..4345961)
Genome browser
AA seq
328 aa
AA seq
DB search
MAEDKVSLELSEETLQSMEVGMAFRDYSGRISSMDFHKASSYLVTASDDESIRLYDVANA
TCLKTINSKKYGVELVCFTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFKGHHDRVVS
LSLCARNEFFISGSMDRTVLLWDQRAEKCQGLLRVQGRPATAYDDQGLVFSIAFGGYIRL
FDARKYEKGPFEIYSVGGDFSDANVVKFSNDGRLILLTTTNGFIHVLDSFRGTLLCSYNV
KPVSTNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWVSTEKEPPVIKWAPGNV
MFATGSSELSFWVPDLSKLGTYAGRKLP
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagataaagtgtcattggaattgtctgaagaaactctccagagcatggaagtc
ggcatggcttttcgcgattatagtggaagaattagttcaatggacttccataaggcctcg
agttacttggtcactgctagtgatgatgaatcgattcgtttgtatgatgtcgccaatgca
acatgtttgaaaacaatcaacagcaagaagtatggggttgaacttgtgtgctttacttct
catcctacaacagtgatttactcgtcaaagaatggctgggatgagtcactgcggcttctt
tccttgaacgacaacaaatatctgcgttattttaaaggccatcatgatagagtcgtatct
cttagcttgtgtgcccgcaatgagttcttcatatcaggttccatggaccggactgttctg
ctgtgggatcaacgggctgagaagtgtcagggtcttctacgtgtccagggaaggcctgct
actgcttatgatgatcaagggttagtcttttcgattgcttttggaggatatataagattg
tttgatgctcgtaagtatgagaagggcccatttgagatatattcagtggggggagacttc
tctgatgccaatgtagtcaaattcagcaatgatggtagacttattcttttgacaaccacc
aatggatttattcatgtgcttgattcatttcgtggcacccttctatgctcgtataatgta
aaaccagtatctaccaattcgactttggaggcctcatttagtcctgagggaatgtttgtc
atatcaggttcaggggatggcagtgtgtatgcttggagtgtccgcagcggcaaagaggtg
gcaagctgggtgagtactgaaaaagagcctcctgttatcaaatgggcaccaggaaatgtc
atgtttgccactggttcttctgaactatctttttgggttccggacttgtctaaactggga
acttatgctggaagaaaattgccatga
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integrated database retrieval system
