Beta vulgaris (sugar beet): 104895439
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Entry
104895439 CDS
T03548
Name
(RefSeq) DNA repair protein RAD4
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104895439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvg03400
]
104895439
DNA repair and recombination proteins [BR:
bvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
104895439
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
LETM2_N
Motif
Other DBs
NCBI-GeneID:
104895439
NCBI-ProteinID:
XP_010680249
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Position
6:complement(6646922..6656240)
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AA seq
889 aa
AA seq
DB search
MENSTTNRKKNKGKTKFQSVNIIRDNQPLKFRQITSNNDEDDALNHDDDVIWEDGCIPSS
SISNNNNNINVDNVAQNKGVTIEFDTLPDLSKKKRIRRATAEDKEFAEIVHKAHLLCLIA
RGRLVDAACDDPLIQAALFSLLPPHLLKISEATKLTANALSPLASWFHQHFHVRSPSSAD
KPFNSALASALEVQGGSPEEVAALSVALFRALNFTTRFVSVLDVASLKPEADGDEASHFE
SSRERKDIFDSSTLMVSKINTDWISSMKLSASNGKNIYDTSGTSVSGTKRGQLPAITEDK
DSLAYNQLKKSDQPVAETRNVSDDDKCQRRKGDLEFEMQLQIAMSATALEAPKRKPETSS
SGSPSSPLHSLSPLKKIKRINEESPSSSHVISTAIGSRKVGAPLYWAEVYCSGENMTGKW
VHVDAVNAIVDGELKVEAAAAACKKSLRYVVAFAGLGVKDVTRRYCAKWYKISPKRIDSE
WWDAVLAPLKELESGATGGMVPLLNQDIKSTNMIEEGKSNELNQGRTLGKSSFSESCVNV
GKDRKKSSTRSPSFDSRSTLEDMELATRALTEPLPTNQQAYRNHPLYAIEKWLTKYQILY
PKGPILGFCSGHAVYPRTCVQTLHTKERWLREGMQVKENELPSKVVKSSSRNRRGQTIEG
EDLSEGGSDGVVSLFGRWQTEPLCLPPAVDGIVPKNERGQVDVWSEKCLPPGTVHLRFPR
LVPVVKRLGINFAPAMVGFEFRNGRSVPVYEGIVICTEFREAVLEAYAEEEQRREEEERK
WEERQALSRWYQLLSSMVIRQRLNNTYMNNLESETVAEPSKSQNKVSCTGTENVNQSTAP
HQETVSATNRFDTQSHEHIFLTDEESYDEGSVTRTKRCRCGVSIQVEEL
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattcgactacaaatcggaagaaaaacaaaggcaaaaccaaattccaaagtgta
aatatcataagagacaatcaacctctcaaattccgccaaattacaagtaataacgacgaa
gacgacgctttaaatcacgacgatgacgttatttgggaagatggttgtattccatcttct
tccatttctaacaacaacaacaacattaatgttgacaacgttgctcaaaataaaggggtt
actatagaatttgatacattgccagatttatctaagaagaagcgtattcgaagagctact
gcagaagataaggaatttgcggagattgtgcataaagctcatttgctctgtttgattgca
agagggcgtttagttgatgctgcgtgtgatgatcctcttattcaggctgccttattctca
cttttaccaccacatttactgaagatatcagaagctaccaaacttactgctaatgccctt
tctcctctcgcctcttggttccatcagcatttccatgtaagaagccctagcagtgcagac
aaaccgtttaattcagctttagcatctgctcttgaagttcaaggagggagtcctgaagag
gttgctgcgctgtctgttgcactattcagagctttaaattttacaacaaggtttgtgtca
gttttggatgtagcatctttgaaaccagaagctgatggagatgaagcatctcattttgag
agcagcagggagaggaaagatatctttgactcttcaacactaatggttagtaaaataaac
acagattggataagttctatgaaattatctgcttccaatggaaagaatatctatgatact
tctggtacctcagtttctggcaccaagcggggacaattgccagcgataactgaagacaaa
gattcacttgcttataatcagttgaaaaagtcagatcaaccagttgctgagacacgaaat
gtttctgatgatgacaagtgtcagaggaggaaaggagacttggaatttgagatgcaattg
caaatcgctatgtctgccacagctctggaagcccctaaacggaaacctgaaacatcttca
agtggctcacctagtagtcccttgcattcgctatcacccttgaaaaagataaagagaatt
aatgaagaatccccttcatcctctcatgttatatccactgcaattggatcaagaaaagta
ggagctccattatactgggcagaggtttattgcagtggtgaaaacatgacagggaagtgg
gtccatgttgatgctgttaatgctatagtggacggtgagctgaaggtagaggctgcagct
gctgcatgtaagaagtctttgagatatgtcgttgcctttgctggacttggagttaaagat
gtcacccgcaggtactgtgcaaagtggtacaagatatcaccaaaaagaattgattcagaa
tggtgggatgctgttttagctccattgaaggagttggaatccggtgcaactggtggaatg
gtccctttacttaatcaggatattaagtccacaaatatgattgaggaaggaaaatctaac
gagctaaatcaggggcgtacattgggcaagagtagcttttcagagagttgtgtaaatgtc
ggtaaagatcgtaaaaaatcttctacccgaagtccgtcctttgatagtaggagcactctc
gaggacatggagttggcaacaagggcgttaactgaacctcttcctaccaatcaacaggct
tatagaaaccatccactgtatgctattgaaaaatggctcacaaagtatcagattctgtat
ccaaaaggtcccatacttggtttctgttctggtcacgcagtttatcctcgaacttgtgtg
caaacactccacacaaaagaaagatggcttcgcgaggggatgcaagtcaaggaaaatgag
cttccctcaaaggtggtaaagagtagctctaggaatcgtagaggacagactatcgaaggg
gaggatttaagtgagggtggatcagatggagtcgtgtctctttttggaaggtggcaaacg
gaacccttgtgtttaccccctgctgtggatggaattgtgcctaagaatgagcgcggtcaa
gtggatgtttggtctgagaagtgcctccctcctggcactgttcatctgcgattcccaagg
ttggttcctgttgtaaagagacttgggatcaattttgctcctgctatggttggatttgaa
tttcgaaatggacgctcagttcctgtatatgaaggcattgtgatctgcactgaattccga
gaagcagttctagaggcatatgcagaagaggagcagagaagagaggaagaagaaaggaag
tgggaggagaggcaggcactttctcggtggtaccaacttctttcatctatggttatacgg
caaaggttgaacaatacttacatgaacaatttagaatcagaaactgttgctgaaccctcg
aagtctcagaataaagtttcatgtactggcaccgaaaatgtcaatcaaagtactgcacct
caccaagaaactgtaagcgcaactaacaggttcgacacgcaaagtcacgagcatatcttt
ttgacggatgaggagagttatgatgagggcagtgtgacacgaacaaaacgatgtcgttgt
ggagtatcaattcaggtagaagagctatag
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