Beta vulgaris (sugar beet): 104895461 Help Entry 104895461         CDS       T03548                                  Name (RefSeq) hypothetical protein   KO K19026   spatacsin Organism bvg  Beta vulgaris (sugar beet) Brite KEGG Orthology (KO) [BR:bvg00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:bvg03400]     104895461 DNA repair and recombination proteins [BR:bvg03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      104895461 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  104895461 NCBI-ProteinID:  XP_019105693 LinkDB All DBs Position 6:6927624..6965918 Genome browser AA seq 3198 aa AA seqDB search MGSGQNCEGPAVLQLHRWDPSHIQTDLSEYQEAFLSPTRELLLLLSYQSEALLLPLSRGD SYCITSQSCKYECQDSVNLSSSSACRADSLENIPSTSGSVGGGVTDNGFCTESNISLPNT YPYISDVHSLAWGLCGDTYKQNKEAPFKEFLIVVGNSGVTFHAFRQADETDAIAGQSLKS EHKLGRWVEWGSSSVSPHDNKAFGDIPPASRMNGSGGTSYHAGQESGSHLPSASTSKKWL RSFLSSAKSVESDGTIWTRFPEKSEFPCSATVVSFFVDFSDSVLFDFYSGTHSVVDKGAY DKNMDSILVDNEYNAIDHTSPDGLTSDTNVAASRPYTCFKVFSSWFHYLIGFVLSSGFDD SENSCDSSCKSQDIVVLVALLDIDGLQWLYAVKLPVKDVSSEVEWVDFQISDKFFMTLNK FGSILLYGAVTGEYIAYLDILQIHGLKPKHNLAEQNILSIDTNDTPENDRLHNKLDAACI LTTQTCGVAHKRCFRRLIVAPYSCLFTVVDECGVLYIVCARDHVPNKYVMTEKILPQYLK LGVLAPWVVGHSDISQQKAVSTSSGSGKSFMRNNFESSGFQHVQQWHVQGINQDDSTLSG LSAESQQSFLNDPDSRFPRCTRKLFIPIAKHGVADIMCFSPSGVTRLIRRNSTKSERNCI VHTSLYIESNFCDDKCLNLVNSTFDLQHDANVVDEEAVGCIFQGCLYLVTRSGVSIVLPA VSLSSNIHTVDSMSYRSTKYSEAAALNLEKSLMYDKSEQPGSGWQVAVIDRIILYEGPDE ADRLCSENGWNLRLSRLRRLQLALAYLKFEEMDLALEMLAEVNIAEEGISLLIFAAIYMM VHKVGNDAEVSAALRILALGSRFSIKMLRKYAILELKNEKSTRGMDISSLPLLLSYKENH DFTDSRRIHEMAYYLEIIRNIQCQLAAKFKRLGKGLVDILEAQQEGPHNSLQDDYQVSTA TDDAIPNQDEPALHKLDVGSNTSENLSLVPVEPLEFRGIMTSEMQDEESIPVTGVIPRKK LFPVENPKEMFARWEMDNLDLRNVVKDALLSGRLPLAVLQLHLHRIKDVDDEKPSDSFAE VRDIGRAISYELLLKGETTLAVSTLQKLGEDIEACLKQLLFGTVSRSLRRQIAEEVKNYG FLRSYELAILDRISLIERIYPCDNFWNTYASRRKEGSEVLLPPEVVPGDYRLHVVSPPAF RNLIIECGNIYGVVLGSWTNFNGSGSSEVDDDSGHAGYWAAAAVWSNAWDQTTIDRILLD QPFLLGVHVTWESQFEYHVCHNDWEEVSKLLYMIPSSLLADRSLLISLDSLHFASSLRCS VGMPDYGSYGCSSVELDAVCIDIPNVNVFNSPTNEMCSSWLRMLIAKELAKRSIFLKEYW DRAGEVIFLLAQCGFLDGEHAMLALNGSLHQPTILDSASGGSFNPNTMQAFHSLFVHYSA QYNLPYFLDLYLDHHKLALDNDAISALLKATGDCQWAKWLLFSRVKGHEYDASFFNARAL LVRDVVSDSSLPVLEASEIISTVDDIAEAGWLMAAVASLMFAPLPMQNCLTSGSVKRSCN SFQCTLENLRPALQKFPTLWRTLVSSCLGHDATQSFWGHKGRNALSTYINWRDSIFYSSG HDTSLLQMLPCWFPKSLRRLIQLFVQGPLGWQSMTSLTADEAFLQRDIELLMNLQDYSEI SAMSWEAAIQKQIEQELYPSSVEETGFALEQHLHRGRALAAFNQLLGSRVQRLKSDVIDQ GQSSASLRGQANVQTDVQTLLSPLTHNEESLLSSVVPLAITHFQDYVLVASCALLLEICG LSASMLRVDVAALRRIHSFYRSNQILQQNQLLSNSATLQAVSSEVTISDSLAHALADYYL HQSGSVNKEDDAQKPVKNHQPSTLSLVLQHLEKASLLSYTGERTCGSWLLTGDGDGHELR SQQKAASQRWNLVTLFCQMHQIPLSSVYLASLARDNDWVGFLSEAQVGGYSFDMVLQVAA KEFTEPRLRTHISTVLRSMQSRKNATLPPSSDPLKGWSESSLSDQTFDTSAELFQILAQC EKEGEPGKALLMRAKELSWSLLAVVASCFPDVVPLSCLTVWLEITAAREISSTRENEFAS QIATNVGAAVEASNSLPAGDRVSTFQYNRKSPKRRRLTNHVLEEFSTANVNGTSNSHARV LAEELKELGTKEDVELMKNSDDWSTSLPKLVALLCQQNQFLPLLRAFEMFLPSCPLLPFI RALQAFSQMRLSEASAHLGSFSFRIKEAASWINSTAVKAADAILSTCPSPYEKRCLLELL ASTDFADGGSGAAYYRRLYWKINLAEPVLRKHEDLQLGNETLDDASLLTALENNGYWEQA RNWARQLEVTGEPWKSAVHHVTERQAESMVAEWKEFLWDVPEERVALWRHCQNLFIKYAF PALQAGLFFLKHAEVVEKELPPRELHELLLLSLQWLSGIITQSNPVCPLHLLREIETRVW LLAVESEAELKGEHVSNLTRFSQDQMSGNSVNIVDQTADVVMKMDSHINIMKTRASDKGG IKENNNLHHKSSQTWDAGISIATGSAKIKRRTKAFGSPRRSMADICEKSADVDESSFPAL TFRYDLQDENLRLDTSFSSWEERVGPAELERAVLSLLEFGQITAAKQLQHKLSSGHVPFE LKIVDAALNFAVLSTPPQKQSLSMLNEELHSLIQSYNLPTEDHLFDPLQVLEGLSDILNE GSGRGLCKRIFAVVKAANILDISFAEAFEKQPIQLLQLLSLKAQDSFDEARVLVQSHPMP ATSLAKILAESFLKGLLAAHRGGYIDSQKEEGPAPLLWRFSDFLKWADLCPSQQEIGHAL MRLVITGQEIPHACEVELLILSHHFYQSSACLDGVDVLVALAATRVEAYVSEGDFSCLAR LITGVGNFHRLNFILGILIENGQLDLLLQKYSAAADVNTAVAQTVRGFRMAVITALKQFD PNDHDALAVVYNHFDLKYETASLLESRAEQSYQRWHHRHNKDHNEDLLESMHFYIEAAEV HSSIDAGNKTRSACAQASLVSLQIRMPDIEWSHLSETSARRLLVDQTRFQEALIVAEAYN LNQPSEWTPVLWNQMLKPEVVEQFVAEFVAVLPLKNSVLIELAKFYRSEMVARVDQSNFS VWLIGGGLPAEWAKYLGRSFRCLLKRTRDMTLRLQMAAIATGFNDVIDACNKTLDKVPEN AGPLVLRKGHGGAYLPLM NT seq 9597 nt NT seq  +upstreamnt  +downstreamnt atgggctctggacaaaattgcgaaggtcctgctgtgctgcagttgcacagatgggatcct tctcatatccaaacggacctttcggagtatcaggaagcttttctctctcctacaagggag ctcttgctgttgctttcatatcaaagtgaagcgttgttgctccctctatcaagaggcgac tcttattgcataacctctcaaagttgtaaatatgaatgtcaagacagtgtaaatttgtcg tcttcgtcagcttgtagggcagattcattggaaaatatcccaagtacctctggatcagtt ggaggaggagttactgataatggattttgtaccgagagcaatatttcactacccaatact tacccttatatctctgatgtacattcactggcttggggcttgtgtggggatacttataaa cagaacaaggaagcaccgtttaaggaatttctcatcgtggttggcaattctggtgtaaca tttcatgcttttcgtcaagccgatgaaactgatgccattgccgggcagtccttaaaaagc gaacataagttagggaggtgggtggaatgggggtctagtagtgtgtctcctcatgataat aaagcttttggagatataccacctgcaagtaggatgaatggatctggaggaacttcatat catgctggacaagagtcagggagccatttgccgagtgcctctacctcaaaaaagtggctg cggtcctttttgagctcagccaagtccgtggaatctgatggcaccatttggacccgcttt cctgagaagtcagagtttccttgctcagcaactgttgtctcattttttgttgactttagt gattctgtgcttttcgacttctattctggtacccattctgtagtagataaaggagcatat gacaaaaatatggatagcattctggtggataatgaatataatgctattgaccatacatca ccagatggtctcacatctgatacgaatgttgcggcaagcagaccatacacgtgtttcaaa gtattttcaagttggtttcattacttgattggatttgttttatcttctgggtttgatgac agtgagaacagttgtgattctagttgcaaaagccaggacatagtggttcttgttgctctc ttagacatagacgggctccagtggctatacgctgttaagcttccagtaaaggatgtgagt tcagaagttgagtgggttgatttccagatttctgacaagttctttatgactctgaacaaa tttggatccattcttctttacggtgcagtgacaggagagtacattgcatatctggatatc ttacaaatacatggacttaaacccaaacataatttggcagaacaaaatatcttatcaata gatacaaatgatactccagaaaatgatagattacataataagttggatgctgcttgtatc ttgactactcaaacttgtggtgttgcccacaaacgatgtttccggaggttgattgttgct ccgtattcctgcctattcactgtcgtcgatgagtgtggtgtactttatatagtatgtgct cgtgatcatgtgccaaataaatatgttatgaccgaaaaaatacttccacaatatttaaag ctcggtgttttggccccatgggttgttggtcattctgatataagccaacagaaggccgtt tccacttcctcaggctctggaaagtcatttatgaggaataactttgaaagttcagggttc caacatgttcagcagtggcatgttcagggcatcaatcaggatgattcaactttgagtggt ctgtctgctgaatcccagcaaagctttctaaatgatccagattctagatttccgcgttgt acaaggaagttatttattcccattgcaaaacatggtgtggcagacattatgtgtttttct ccatctggagtcacccgcctcattagaagaaatagtaccaaaagtgaaaggaattgtatt gttcatactagtttgtacatagagtcaaacttttgtgatgacaagtgcttgaatcttgta aacagtacatttgatttgcaacatgatgcaaatgttgttgatgaagaggcagttggttgc attttccaggggtgtttatatttagttactaggagtggagtttcaatagttcttcccgct gtctctttgtcatctaacatccataccgttgactctatgagctaccggtcgacgaaatat agtgaagcagctgcactcaacttagagaagtcattgatgtatgataaatcagaacaacct gggtcaggatggcaagtggcagtaattgatagaattattttatatgaaggtcctgatgaa gctgataggttgtgttcggagaatgggtggaacctccgactttcccgactgcgtcgtctt caattggcattggcttacttaaaattcgaagagatggacttagccttagagatgcttgcg gaggtcaatatagctgaagaagggatctcgttattgatctttgctgccatttacatgatg gttcacaaagttggaaatgatgctgaggtatctgctgcattaagaatactagcattagga tcccgcttttcaataaaaatgctccgtaaatatgccattttggaactgaagaatgaaaaa agcacaagagggatggacattagctcactacctctacttctatcgtacaaagagaatcat gatttcacagattcaaggaggatacatgagatggcctattacttggagataattcgtaat atccaatgtcaacttgctgcaaaatttaaaaggcttgggaaaggactggtggatatcttg gaagcacaacaggaaggcccacataactcattgcaggatgattatcaagtttctactgct acagatgatgcgataccaaaccaagatgaacccgccttacacaaattggatgtgggctct aatacttctgaaaatctttctttagtgcctgttgaacccctggaatttagaggaattatg acttcagaaatgcaagacgaagagtcaatccctgtgacaggagtgatcccaagaaagaaa ctttttcctgtggagaaccctaaagaaatgtttgcacgctgggagatggacaatttggac ttgagaaatgttgttaaagatgctttattgtctggccgtcttccactagcagttcttcag ctgcatcttcaccgtataaaagatgttgatgacgagaagcccagcgatagttttgctgaa gttcgtgatattggaagggcaatctcctatgaactactgttaaagggtgagaccacgctt gctgtttctacactacaaaagcttggagaagatatagaagcatgtctgaagcagttgctt tttggtactgtgagcagatcgctgcgtaggcaaattgctgaagaagtgaaaaattatgga tttctcaggtcatatgagctggcaatacttgacaggatatcgttgattgagagaatttac ccatgcgataacttttggaatacatatgcttcccgaagaaaggaaggaagtgaagttttg ctgcctcctgaagtagtacctggagattatagattgcatgttgtgtctccccctgctttc agaaatcttattattgagtgtggtaacatttatggagtagttttaggttcatggacgaat ttcaatggttctggcagctctgaggtcgatgatgacagtggccatgcagggtactgggct gctgccgccgtgtggtctaatgcttgggaccaaacaaccattgatcgtattttgctggac caaccttttctactgggtgttcacgtgacgtgggaatcacaattcgagtatcatgtatgc cataatgactgggaggaagtatctaaacttctgtacatgattccaagctcgttattagct gatcgaagtctcctcatcagtctggacagtttgcactttgcttcctcactcagatgcagc gtgggcatgccagattatggcagctatggttgctcttctgttgaattagatgcagtttgt atagacattccaaatgttaatgtttttaattctccaacgaatgaaatgtgctcatcatgg ctgagaatgctcatagctaaggagcttgcaaagagatccatttttctcaaggaatactgg gacagagctggagaagtaatctttttgctggcccaatgtggctttcttgatggagaacat gcaatgttggctctgaatggatccttgcatcaaccaaccatcctggattctgcaagtggt ggatcatttaacccaaatactatgcaggcctttcatagtctttttgtgcattactctgca caatataacttgccatatttcctagacctatatcttgatcatcacaagttggccctggac aatgacgctatcagtgcattactgaaagctacaggagactgtcaatgggcaaagtggttg ctcttttccagggttaaggggcatgaatatgatgcatcgttctttaatgcgcgtgcactt ctagtccgtgatgtagtctcagatagtagcctccctgttttggaggctagtgaaatcatc tctactgttgatgatattgctgaagctggatggttgatggcagctgtggcctcattaatg tttgctcctttgcctatgcaaaactgcctgaccagtggtagtgtgaagaggagctgtaac tctttccaatgtacactggaaaatctgaggcctgcccttcaaaagtttcctactctatgg cgcacacttgtgtcatcttgtttaggacacgatgctactcagagcttttggggtcataaa gggaggaatgctttgtcgacctatatcaactggcgggatagcatcttctattcctctgga catgatacatcacttctgcaaatgctgccttgctggtttccgaaaagtttgcggaggtta attcaactttttgtccagggtccactgggatggcagtcaatgacaagtctgacagcagac gaagcttttctgcagcgtgatatagaacttcttatgaatctccaggattactctgagatt agtgcaatgtcctgggaagcagcaattcagaaacaaattgaacaggaattatatccttct tcagtagaggaaactggatttgctctggaacaacacttgcatcgaggacgtgcattggct gccttcaatcaacttcttggctctcgggtccaaaggctgaaaagtgatgtcattgatcaa ggacaatctagtgcatcacttcgtggacaagcaaatgtccagacagatgtgcaaacgctg ctttccccactgacgcataatgaagagtctcttctttcctcggttgtgcccctggctata acccattttcaagactatgtgctggttgcctcatgtgctttactgttggagatttgtggt ttatctgctagcatgcttcgtgttgatgttgctgcgttgagacggatacattccttctac agatccaatcaaattctgcaacaaaaccaactcttgtccaacagtgccacgttgcaggct gtttctagtgaagtgactatatcagattctcttgctcatgctctggcagattattacctt caccagagtggtagtgtaaataaagaggacgatgctcagaagcctgttaagaatcaccaa ccttcaactctttcgcttgtccttcagcatctagagaaggctagtcttttatcatatact ggtgagagaacttgtgggtcatggttgctgactggtgatggtgatggacatgaattaaga tctcaacagaaagctgcaagccagcgctggaatttagtaactcttttttgccagatgcac cagattcctttgagcagtgtgtaccttgcttccttagctagagacaatgactgggttgga tttctctcagaggcacaggttggtgggtattcttttgatatggtgcttcaagtggctgca aaagagtttactgaaccacgtcttaggactcacatatcaacggtattgagaagcatgcag tcgaggaagaatgctaccttgcctcctagttcagatcctctaaaaggctggagtgaatct tccctttcagatcaaacttttgatacatctgcagaactttttcaaatattagctcagtgt gaaaaagaaggagaaccaggaaaggcacttcttatgagggcaaaagagttgagctggtct ttgttggctgtagttgcttcatgttttcctgatgtcgttccattgtcatgcttaacagtc tggctagaaattacggcagcaagggagatctcatcaacaagagagaatgaatttgcttct cagatagcaactaatgttggagctgctgtagaggcttcaaattccctgccagctggtgat agagtctcaacttttcaatataatcggaaaagtccaaagcgtcgacgactcacgaatcac gtgttagaagaattctccactgccaatgtgaatgggacttcaaattctcatgcaagagta cttgctgaagagttgaaggaattaggaactaaggaagatgtcgaattgatgaagaattca gatgactggtccacgtctttgccaaaattggttgctttactctgtcaacaaaatcagttc cttcctttgctgagagcttttgaaatgtttcttccctcttgtcctttattaccattcatc cgtgctcttcaggcattttctcagatgcgtctatctgaagcttcggcacatttggggtca ttttcattcagaattaaggaggcagcgtcttggataaattcgactgcagtgaaagctgct gatgctatactttcaacatgtccatcaccttatgaaaaaagatgcttactagagcttctt gcttctactgatttcgctgatggaggatctggtgctgcatattatcggcgtctgtactgg aaaatcaacttagcagagcctgtgcttaggaagcatgaggatcttcaattaggaaacgag actcttgatgatgcttctctcctcaccgctcttgaaaacaatgggtactgggaacaagct cgcaactgggctcgtcagttagaggtcactggcgaaccatggaagtctgctgttcaccat gttactgaaagacaggcggagtcgatggttgcagagtggaaagaatttctttgggatgta cctgaagaaagagtcgctttatggcgtcattgtcaaaacttgttcattaaatatgcattt cctgcattgcaggcaggactgttctttcttaaacatgcagaggttgtggagaaagaactt ccaccaagagagcttcatgaattgttactactttctctacagtggctaagcgggataatt acgcaatctaacccagtatgccctcttcatctcttacgagaaattgagacccgagtttgg cttctagctgttgaatctgaagctgaactaaagggtgaacatgtttccaatttgactaga tttagtcaagatcagatgtctggaaatagtgtcaacattgtagaccaaactgcagatgtt gtcatgaagatggatagccacataaatattatgaagactagggcatctgataaaggaggt attaaagaaaataataatttgcatcacaagagctcgcaaacctgggatgctggtatatca attgcaactggtagtgcgaagattaaacgtcggactaaagcatttgggtcacccagaagg tctatggctgacatctgtgagaagagtgctgatgttgatgagagttctttccctgctttg accttcaggtatgacttgcaggatgaaaacctgagacttgacacatcattttcaagttgg gaagaacgagtgggacctgcagagcttgaaagggcagttctttctttattggaatttgga caaataactgctgccaagcaattgcaacataagctttcatctggccatgtgccttttgag ctgaaaattgtggatgctgccctgaattttgccgtgctgtcaacaccaccacagaagcaa tccttgtccatgctgaatgaggaattacactctctaatccagtcatataacttacccact gaagatcatctttttgatccactccaggtactggagggtttatctgacatattgaatgaa ggtagtggacgtggactttgcaagagaatctttgcagttgtgaaggctgctaatattttg gatatttcatttgcggaagccttcgagaagcagccgattcaattgctacagttgctttct cttaaagcacaagattcttttgacgaagcaagagttttggttcaatctcatcctatgcca gctacaagtcttgcaaaaattctggcagaatccttcttgaagggtttattagcagcacat cgtggcggatacattgattctcagaaggaggaagggcctgctcctttgctgtggagattt tcagactttttaaagtgggctgatttgtgtccctcacaacaagagatagggcatgcgttg atgcgattagttataactgggcaagaaattccacatgcttgcgaggttgaacttcttatt ctatcgcaccacttttaccagtcatcagcttgtttagacggggttgatgttcttgtagcc cttgctgcaacaagggtggaggcttatgtctctgagggagacttttcttgtttggctcgt ctcataactggagttggaaacttccatagactgaattttatactcggcattcttattgag aatggacaactggatcttcttcttcaaaagtattctgcagctgctgatgtaaacactgca gttgctcagactgtccgaggattccgcatggctgttattacagcactgaaacagtttgac cccaatgatcacgacgctttggctgtggtctataatcactttgacttgaagtatgaaaca gcttctttactggagtcacgagctgagcagtcttaccagagatggcaccatcgccacaac aaggaccacaacgaagacctccttgaatccatgcacttctacattgaagcagcagaagtc cattcctctattgatgctggcaataaaactcgctctgcttgtgctcaggcttccctcgtc tcccttcaaattcgaatgcctgatatcgagtggtcacatctgtctgaaaccagtgctcgc agattacttgttgatcagacacgattccaggaagcattgattgtggctgaagcctataat cttaatcaacctagtgagtggacacctgtgttatggaaccagatgctaaaaccagaagtc gtagagcaatttgtggctgaatttgtggctgtgcttcctctcaagaattctgtgcttatt gaattggcaaaattttacagatcagagatggtagcaagggtagaccagtccaatttttca gtctggctgataggaggtggtttgcctgctgaatgggctaagtatctggggcgatcattt cgctgtttactaaaaagaacaagagatatgacgctccgtttgcagatggctgctatcgca actgggtttaatgatgtgattgatgcatgtaacaagaccttggacaaggtgcctgaaaat gccggaccacttgtattgaggaaagggcatggtggggcatatctcccattaatgtag

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