Beta vulgaris (sugar beet): 104895478
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Entry
104895478 CDS
T03548
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3
KO
K14948
polypyrimidine tract-binding protein 2
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bvg03041
]
104895478
Spliceosome [BR:
bvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104895478
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
RRM_3
RRM_PARP14_3
RRM_fung
DUF1797
Motif
Other DBs
NCBI-GeneID:
104895478
NCBI-ProteinID:
XP_010680298
LinkDB
All DBs
Position
6:7153486..7165811
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AA seq
445 aa
AA seq
DB search
MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDVATAINLVDY
YTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHHVIYPMTVDVLN
QVFSPYGFVEKVVTFQKSAGYQALVQYQTRQSAASAMSALHGRNIYDGCCQLDVQYSNLT
ELQVNSNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGLFPFQPTGSGAVAYGQMGNAAAM
AAFSGGLPPGVSGTNDRCTVIVSNLNPDRIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV
EMSDGFQAELAVHFLKGAILFGKKIEVNFSKYSNITPSPDTRDYQNSNLNRFNHNAAKHY
KYCCSPTKMIHLSSVPEDVSEEEIVELIEEHGQVVNTKVFEANGKKQALVQFETEEQATE
ALVSKHATSVCGSIVRISFSQSQST
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaacttccaaagttattcatgttcgcaatgtgggccatgaaatcacagagaat
gatttacttcagttggttcaaccatttgggtctgtcaccaagttagtgatgctacgtacc
aagaaccaggcattactccaaatgcaggatgtggcaacagcaattaatttggtggattac
tatacaaatgttcagcctaatgtgaggggacggaatgtttacatgcaattttcttcgcat
caagaattgacaacagatcagactcaaggacgtaaaagtgatacggatggacaaccaaat
cgtattcttttggtcagtatacatcatgtcatttatcccatgacagttgatgttctcaat
caagtgttttctccctatgggtttgtggaaaaagttgttacattccagaagtcagctggt
tatcaagctctcgtccagtaccaaacacgccagagtgctgcttctgcaatgagtgccctt
catggacgtaatatatatgacggatgttgtcagctagatgtacaatactcaaaccttaca
gagttgcaagtgaattccaataatgatcgatcgagagattttacaaacccaaatcttcct
tcggaacagagaggcagaagctcacaatctggttatggtgatgcaggggggctgtttcca
ttccaacctactgggagtggtgcagttgcatatggacagatgggaaatgcagcagccatg
gcggctttttctggtggccttcctcctggtgttagtgggaccaatgacagatgtactgtc
atagtatctaatctaaaccctgatagaatagatgaagacaagctgttcaatctattttcg
ctgtatggcaacattgtaaggattaaacttcttcgaggcaaacctgatcatgcccttgtc
gaaatgtccgatggttttcaagctgaactggccgttcacttcttgaagggagcaatactg
tttgggaaaaagatagaggtgaacttctccaagtattcaaacataacaccatcaccagac
acccgtgactaccagaactcgaacctaaatcgtttcaaccataacgcagcaaaacactat
aaatactgttgttcgcccaccaaaatgattcacctatcaagtgtccctgaagatgtaagt
gaggaggagattgttgagctgattgaggaacacggtcaggttgtcaataccaaggttttc
gaggcaaacggcaagaagcaagccttagttcaatttgagactgaagaacaagcaactgaa
gcccttgtttccaagcatgctacttctgtatgtggatcgatcgtccgtatctctttctcc
caatcacaaagcacttga
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