Beta vulgaris (sugar beet): 104895615
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Entry
104895615 CDS
T03548
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bvg03041
]
104895615
Spliceosome [BR:
bvg03041
]
Common components
Common spliceosomal components
General mRNP proteins
104895615
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Ortholog
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GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Zn_peptidase
Motif
Other DBs
NCBI-GeneID:
104895615
NCBI-ProteinID:
XP_010680478
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Position
6:7140731..7150366
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AA seq
553 aa
AA seq
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MDFDEYEYLEKTVEEETEGRSRKKERSGEMREKGYRKRVEDEGDDHREEDDEDERKRKKS
RRDDENGGGGGERKREDRDKRREKEERHSHRDEKEKEREKDREKEKEREKDRERRSRSRS
TRHGSRERERSRSIRRDSRERERSRERERERRERELREIESRDSRRIKEKREAVEPEADP
ERDQRTVFAYQMPLKAAERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVP
MAIALTGQLLLGQPVMVKPSEAEKNLVQSTAATGSGVTGPYGPTDRKLYVGNLHFNMTEQ
QLRKIFEPFGPVELVQLPLDLETGHCKGFGFVQFAQVEHSKAAQSLNGKIEIAGRYIKVS
SVTEHVGGQDTGTTAADFDDDDGGGLSLNPRSRALLMQKLDRTGTALSIAGTLGVPVLNS
TASVQQPFVVNGQAATPAPTLPGQVLSSPASEPVGNPSECLLLKNLFDPATETDPEFDLD
IKEDVEEECSKFGPVKHIYVDKHSAGHVYLRFDNKEGAMNAQRGMHMRWFARRLISAIFM
QPQDYEAKFGAAA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgacgagtacgagtacttggagaagacagtggaagaagaaactgaaggtcga
tcaagaaagaaggagagaagcggtgagatgagagagaaaggttacagaaaaagggttgaa
gatgaaggcgatgatcatcgagaagaagatgatgaagatgagaggaagaggaagaaatcc
agaagagatgatgaaaatggcggaggtggaggagagagaaagcgagaggatagggataag
aggagagagaaagaggagagacattcacatagggatgagaaggagaaggagagagagaag
gatagggagaaggagaaggagagagagaaggatagggagaggagaagtaggagtcggtca
acgaggcatggtagtcgggagagagagaggagtcgatcgattaggcgtgatagccgcgag
cgagagaggagcagggagagggagagggagaggagggagagagagttgagagaaattgag
tccagagatagcaggagaatcaaggaaaaaagggaagcagtggaacctgaagctgatcca
gagagggatcagagaactgtttttgcataccagatgcctctgaaggcggctgagagagat
gtttatgaatttttttcgaaagctggcaaggtgagggatgtccgactgataatggatcga
aactcaaggcgttcgaaaggggttgggtatattgaattttatgatgcgatgtccgtgcca
atggcgattgctctaacaggtcagctactccttgggcagcctgtgatggtcaaaccatct
gaggctgaaaagaaccttgttcaatctacagctgctactggttcaggtgttacgggtcct
tatggaccaactgatagaaagttgtacgttggcaatttgcacttcaacatgacagagcaa
cagctgcgtaagatttttgaaccatttggtcctgtggaactggtgcaactaccccttgac
cttgagactgggcactgcaaaggttttgggtttgttcaatttgctcaagttgaacattcg
aaggctgctcaaagtttaaatgggaaaatagaaattgctggcagatacatcaaggtttca
tctgtcactgaacatgttggtggacaagatactggaacaactgcagcagacttcgatgat
gatgatgggggtggtttgtctttgaatcctaggtccagagcattgttgatgcaaaagctg
gaccgcactggtacagctttaagcattgcaggaacacttggtgtaccggtgcttaacagc
acagcttctgtgcagcaaccttttgtggtcaatgggcaagccgccactcctgccccaaca
ctccctggccaagtactctcttccccagcttctgaacctgtaggcaaccctagtgaatgc
ctgctactgaagaatttatttgatccagccactgagacggatccagagtttgacttggac
attaaagaagatgttgaagaggagtgctcaaagtttggtccagtgaaacatatctatgtt
gacaaacacagtgctggtcatgtctacctacgttttgacaacaaggagggtgcaatgaat
gcccagcgtggtatgcatatgagatggtttgctcgtaggttgatatcagccatcttcatg
caacctcaagattatgaagcaaagtttggagctgctgcttga
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