Beta vulgaris (sugar beet): 104895719
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Entry
104895719 CDS
T03548
Name
(RefSeq) formin-like protein 5
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03013
Nucleocytoplasmic transport
bvg03015
mRNA surveillance pathway
bvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104895719
09122 Translation
03013 Nucleocytoplasmic transport
104895719
03015 mRNA surveillance pathway
104895719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvg03019
]
104895719
03041 Spliceosome [BR:
bvg03041
]
104895719
Messenger RNA biogenesis [BR:
bvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104895719
Spliceosome [BR:
bvg03041
]
Complex C
Other components
EJC/TREX
104895719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
SAP_new25
Motif
Other DBs
NCBI-GeneID:
104895719
NCBI-ProteinID:
XP_010680595
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All DBs
Position
6:10418057..10423547
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AA seq
717 aa
AA seq
DB search
MKASSGFPVLDNRPIDQWKVTELKEELKRRKLTTRGLKEELVRRLDEALRVEMEVEEEEG
EEAAPVGSEMGAAEEEVDNGVQDPKPDNVEMMGEKEDDKDGVEAPKDDDIGEAAVAEQPG
KEFSELGVGNPGNAEENVGDADYGVTKLDAESVLVDSEKSVEQPIEGRGHEEIELGLVSD
QPPEVGDMLATSDVPIAGLDKIDSEVLLAENAGDGERLQHGDMERDNEGFKAQELPEDLK
PLHEDGKLDSSDSNNQVSEVSSSIGFPIKSNSISTDSVYFNEKNDLKDNIIADNVKLESD
VKPEMVQPSSSDIVPDGGKSHPSDVEEPQENKVFGQQTDNNVTNADVSQKNYSADLGSSE
KLNLDRSSGDDSMEEDVLESKHIDSHYNSEEVVEKTEIKEITTVTEERPVATMDIDVPEK
EIGTRHENNVVAAASTDKRKLSDQEPVLNNEPPKRQRRWKTESDNVKEPQISNISPQALV
KDVPQPAVLRRNLSGSNSSSGANDPPKEREVPPSAKPATDSLRIDRFLRPFTLKAVQELL
AKTGTVTSFWMDHIKTHCFVSYSSVEEATETRNAVFNLQWPPNGGRQLVAEFVDPEEVKS
RLDSKAPPAPAAPASSGPTVTEPPPTMPQPSPRQQSLRQQMSQQPTLPPPPPLSNPPQAR
EWAGPPPPPQIEKVEAPIVTLDDLFRKTKATPRIYYLPLSEEKVSAVLEARRRNPKP
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcttcgtcgggatttcctgttctggataaccggccgattgatcaatggaaagtt
acggaactgaaggaagaacttaagaggcggaagttgaccacaaggggtttgaaagaagag
ctagttcgacggttagatgaagctttacgtgttgagatggaagttgaggaagaagagggg
gaggaagcagcgcctgttggtagtgagatgggagctgcggaagaagaggtcgacaatggt
gttcaggacccaaagcctgataatgttgaaatgatgggtgagaaagaagatgataaagat
ggtgttgaggctccaaaggatgacgacattggtgaagctgccgtagctgagcaacccggt
aaggaattcagtgaactaggggtaggtaatcctgggaatgctgaagaaaatgtgggtgat
gctgattatggagtcactaagctggatgctgaatcagtattggtggatagtgaaaagagt
gttgaacaaccaattgagggtagaggccatgaagaaatagagttagggctagtgagtgat
caacctccggaggtgggcgacatgttagctacaagtgatgtacccattgcaggtttggac
aaaatagatagtgaggttttgttagctgaaaacgcaggggatggggagaggttgcaacat
ggtgatatggaaagggacaatgagggtttcaaagcgcaggagctacctgaggatttaaag
ccactacatgaggatgggaagctggactcttctgattcaaacaaccaggtatctgaggtc
agctctagtatagggtttcccataaaatctaattctatttctactgattctgtgtatttt
aatgaaaagaatgacctaaaggataacataattgctgataatgttaaattagaatctgat
gttaagcctgagatggtgcaaccatcatcaagtgatatagtccccgacggtggcaaatca
catccaagtgatgttgaggagccacaagaaaacaaggtttttggtcaacagacagataac
aatgttacaaatgcggatgtgagccagaaaaattatagtgcagatttggggtcttctgaa
aagttaaatttagatcgaagttcaggagatgattccatggaggaagatgtcttagaaagt
aagcatattgactcacattataattctgaagaagttgtagagaagactgagataaaggag
atcactacagttactgaagaaaggcctgttgcgaccatggatattgatgttcctgaaaaa
gagataggtactcgtcatgaaaataatgttgttgccgctgcttcaactgataagagaaag
ctttcagatcaagaaccagttcttaataatgagcctccaaagaggcagcgtagatggaaa
actgaaagtgacaatgttaaggagcctcaaatctcaaatatttctccccaagctttagtt
aaggatgtgccacaacctgctgttctgagacgtaatctctctggatctaattctagtagt
ggtgctaatgacccacctaaagaacgtgaagttccaccctctgcaaagcctgcaacggat
tccctcaggattgatcgttttctgcgcccttttaccctgaaagctgttcaggaacttttg
gccaaaacagggaccgtcaccagtttctggatggaccacataaaaacacattgctttgtc
tcttactcttctgttgaagaagcaacggagacaaggaatgctgtcttcaatttgcagtgg
cctccaaatggcggtcgccaactcgtggctgagtttgttgatcccgaggaagttaaatca
cgtttggactccaaagcgcctccagctcctgcagctcctgcgagttctggcccaacagtt
accgaaccacctccaacaatgccacagccttcacctcgccaacaaagtcttagacagcag
atgtcgcaacaacctactctaccaccgccaccccctctgtcaaatccaccacaggctagg
gaatgggctggtccacctccaccccctcaaattgaaaaagtagaggctcctattgtgacc
ctggatgatctttttcggaaaaccaaagcaacacctcggatctattacttgccattgtcc
gaagagaaagtgtctgccgtacttgaagctcggcgtagaaaccctaagccatag
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