Beta vulgaris (sugar beet): 104895787
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Entry
104895787 CDS
T03548
Name
(RefSeq) ATP-dependent RNA helicase DEAH13
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bvg03009
]
104895787
Enzymes [BR:
bvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104895787
Ribosome biogenesis [BR:
bvg03009
]
Eukaryotic type
90S particles
Helicases
104895787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
Helicase_C
HA2_N
HA2_C
DEAD
AAA_22
nSTAND3
ATPase
AAA_23
Motif
Other DBs
NCBI-GeneID:
104895787
NCBI-ProteinID:
XP_010680687
LinkDB
All DBs
Position
6:complement(11582687..11593146)
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AA seq
1303 aa
AA seq
DB search
MDSSLGDSNALILPPKTKTRKEKFNSKLSCQTIKLSNSQKRKLKKLEEEKKNQLMLSKSL
ETLEKYKISDDAHSLLWSSENIGQAETMQQKRRRVMQFSKAGLDVPVSDMGTKRMEVRSC
EGEVGASESSPLEIADEKVCFEPVLMKRVSRSSSTYLVPHEGTEPNGLIEEVASEDSCKV
INLDAGNFSASLPPDGDKKTVAAVGELNGESRADSCATRYVGADPIIGPKITPTVVHVSR
PKDVENGRRDLPIIMMEQEIMETINSHISVIICGETGCGKTTQIPQFLYEAGYGSAKCPT
KRGIIGVTQPRRVAVLSTAKRVAYELGFHLGKEVGFQVRHDRKIGENCSIKFMTDGILLR
ELQSDFLLKRYSVIILDEAHERSLNTDILIGMLSRVIIQRQAIYEDQQKVLVREKIKPED
ILFPLKLILMSATLRVEDFTSGRLIFHEPPPVIKIPTRQFPVTTHFSKKTVLTDYIGESY
KKVLKIHKKLPSGGILVFLTGQREVEDLCRMLRQASKQFGTGSCEVNSEIETTTMTGTAQ
IDGYDMKQIDEALDTRASSTEQQQMDRFSSYDECHDESDNNDAYSSVSSGSDSESGFGSD
FEDLKTSEVDDCIGDVTEDVNYDSLKAAFEALTEKTMPTPEHNRQEINSATQGVCSIWPS
SLTKKKGEKKGSVVGPLHVLPLYAMLPASAQLRVFEKIKEGERLVVVATNVAETSLTIPG
IRYVVDAGKEKVKHYNPSNGMESYEIQWISKASAAQRAGRAGRTGPGHCYCLYSSAALSN
QFSEFSCPEILKTPVDGVILLMKSMGISKVANFPFPTPPDATSLGKAENCLMALEALDGE
GRLTPLGKTMAQYPLSPRHSRLLLLAIQITKKEISDVRPNLVLGYAVAVAAALSSSNPFS
FQFDGSRSNSEGIEQEDDYCTLSQKNGDQQTKLTRKQMKRSAGLSRAKFYNLKSDALTVA
YTLQCFEQSKNPSQFCEENTLHLKIMVEMSQLRKQLLQLIFNQRYCGLQQEFSWTYGTIK
DVEDDWRLSCDKNPLLENEEDILCQAICAGWADKAAKRIRGASVLSEGDRKVNAMRYQAS
LVEETVFLRRSSSVSRAAPEFLVYNEMLCTKRPYIHGATSVKSEWLVKHAGSLCTYSGSL
TDPKPFYDPLCDQVLCYVIPYFGPHLWELPLSKVPIKDVQQRVTVFAYALLDGQVLPCLK
SVKKFMASPPSSILKPEALGQKRVGNLISKLRTNSRTIDSSAMLKEAWKEDPQLLHSEIL
NWFQDGFHRVFEELWEKMHQEALSVPRSRFPDRTRKNKRNVKD
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atggattcttccttaggtgatagcaatgcacttatattgccacctaaaacaaagactcgt
aaagagaaattcaattctaagctaagctgtcagactataaagttgagcaactcccagaaa
aggaagttaaagaaattggaggaagagaagaaaaatcaactaatgttgtcgaaaagcttg
gaaactttagagaagtataagataagtgatgatgcacattcgcttctatggtcctctgag
aacattggccaggcagagactatgcagcaaaagcgaaggagggttatgcaattttctaag
gctggtttagatgtaccagtgagtgatatgggtaccaagagaatggaagttcgttcatgt
gaaggtgaagttggtgcttctgaaagctctccactggagattgctgatgagaaggtttgc
ttcgaaccagtgcttatgaaaagagtaagcagaagtagttcgacttacttagtgcctcat
gagggaaccgagcctaatggactgattgaggaagtagcaagtgaagatagctgcaaagtc
attaatctggacgctggaaatttttcagcctctctgcctcctgatggtgacaagaaaact
gtagctgcagtgggtgaactcaatggtgagtctagagctgattcttgtgcaacaagatat
gtaggagcggatcccatcataggacctaaaatcacccctactgtggtacatgtgtcacga
ccaaaggatgtggaaaatggtagaagggacctcccgattattatgatggagcaggagata
atggaaactataaacagtcatattagtgtgattatttgtggagagactggttgtggaaag
acaacacaaattccccagtttctttacgaagctggctatggttcagcaaaatgtcctacg
aaaaggggtattatcggtgtaactcagcctcgtcgtgtggctgtgctttctacagcaaaa
cgagtagcatatgagcttggatttcatcttggtaaggaggtcggttttcaagtcaggcac
gacagaaagattggagaaaactgctccatcaaatttatgactgatggaattttgcttcga
gaactgcagagtgatttcttgttgaagcgttactctgtcataatattggatgaggctcat
gaaaggagtctgaacacagacatcctcattgggatgctttctcgtgttattatccaacgc
caggcaatatatgaggatcagcagaaggtactcgttcgagaaaaaattaaaccagaagac
atattattccctctaaaactcattttgatgagtgctaccttgcgtgttgaggatttcact
tcaggaagattaatattccatgaacctccacctgttatcaaaattccaacaagacaattt
cctgtaacaacacacttctcaaagaaaacagtgcttactgactatattggtgaatcctat
aagaaggtcttaaaaattcacaagaagctgccttctggtggcatactggtgtttcttact
ggccaaagggaagtagaggatttgtgccgtatgcttcgtcaagcttcgaagcaatttgga
actggaagctgtgaagttaattcagagattgagacaacgacaatgactggcactgcccaa
attgatgggtatgatatgaaacagattgatgaagcccttgatactcgtgcaagctcaact
gaacaacaacaaatggacaggttcagttcatacgacgagtgtcatgatgaatcagacaac
aatgacgcatattctagtgtgagttcagggtcagatagtgagtctggttttggaagtgat
tttgaagatctgaagacttctgaagtggatgattgcattggggatgtcacagaagatgtg
aactatgattctttgaaggctgcctttgaagctttgacagaaaagacaatgccaacacca
gaacacaacaggcaagaaataaattctgcaacccaaggtgtttgctcaatttggccttcc
agcttgactaagaaaaaaggagagaaaaagggttctgttgttggtccattacatgttttg
cctctttatgctatgcttccagcttctgctcagcttcgtgtttttgaaaaaatcaaggaa
ggggagcggctagttgttgttgctaccaatgtcgctgagacctctttgactattcctggg
ataaggtatgtggtcgacgctggaaaggaaaaggtgaagcattacaatccctctaatggt
atggaatcatatgaaatacagtggataagtaaggcatctgctgctcaacgtgctggaaga
gctggaagaacaggacctggtcattgttattgcctctattcttctgcagccttatctaat
caattttcagaattctcctgtcctgaaattttgaaaactcctgttgatggtgttatcctc
ctcatgaaatccatgggaatcagtaaggttgcaaatttcccgttcccaacccctccagat
gccacctcattagggaaagctgagaactgcttaatggctcttgaagcacttgatggtgag
ggtagacttacacctttgggcaagacaatggctcaatatcccttgagcccacggcattcc
aggctgctgctccttgctatacagatcacaaaaaaggagattagtgacgtacgaccaaat
ttggttctaggttatgcagtggcagtagctgctgccttgagctcgtcaaatcctttttct
tttcagtttgatggcagtcggtccaattctgagggcattgagcaggaagatgattattgt
actctcagccagaaaaacggagaccagcaaaccaagttaacaaggaaacaaatgaaaaga
tccgctggcctttctcgtgcaaaattctacaacctaaagagtgatgctttaactgtagct
tacaccttacagtgttttgagcaatctaagaacccatctcaattttgtgaggagaacaca
ctacaccttaaaattatggtagaaatgtcccaattgagaaagcaactactgcaattaatc
ttcaatcagagatattgcgggttgcagcaagagttttcgtggacttatggaaccataaaa
gatgtggaagatgattggagactctcttgtgataagaatcctctcttggaaaatgaggaa
gacatcctatgccaagctatatgtgctggatgggctgacaaggctgctaagcgtattaga
ggagcaagtgtgttatcagagggagatagaaaagtcaatgctatgcgctaccaggcatcc
ttggttgaagaaacagtattccttcgccgctcgtcatctgtctccagagcagctcctgaa
tttttggtgtacaatgagatgctctgtacgaaaaggccatacatacatggagcaacgagt
gtaaagtcagagtggctggtgaaacatgctggatctttgtgtacctattcagggtctttg
acagatccaaaacctttttacgatcctctctgtgatcaggtattatgttacgttattcca
tattttggccctcacctgtgggaactccccctaagcaaagtgccaatcaaagatgttcaa
cagcgtgttactgtctttgcttatgctttgcttgatggtcaagtcctaccatgcttaaaa
tctgtcaagaagttcatggcaagcccacctagcagcatcttgaagccggaagcattgggc
caaaaacgtgtgggcaatcttataagcaagttgaggactaattcaagaactattgacagc
agtgccatgctgaaagaagcatggaaagaagatccacagctgttgcattcagaaatactg
aactggtttcaggatgggtttcatcgtgtatttgaagaattgtgggaaaaaatgcaccaa
gaagccctttcagtacctcgatctcgctttcctgacagaactaggaaaaacaaacgcaat
gtgaaagactga
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