Beta vulgaris (sugar beet): 104896019
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Entry
104896019 CDS
T03548
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2-1
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bvg03016
]
104896019
Enzymes [BR:
bvg01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
104896019
Transfer RNA biogenesis [BR:
bvg03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
104896019
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
104896019
NCBI-ProteinID:
XP_010680990
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All DBs
Position
6:complement(15362350..15365638)
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AA seq
248 aa
AA seq
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MAPRWKGKDSEAKALAEPMSEIVLALQSSLTTSKCKGLISGCRVLIEADTEQSELLNRAC
FGRLIVTSQKDRQWYELTLHEAFYLCYTLNCLKIIGDDGVVKSNKELWHFMISEVDMFPK
FFQAYSHLRKSNWVVRSGSQYGVDYVVYRHHPALVHSEYAVIVLSERDGISNERLKLWSD
LYGTIRLCGGVAKTLLVLHVLGISNETDSPICLENCNVEARTISRWIPEQTREKRSDANF
HRVIKPHI
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggccccaagatggaaagggaaggattcagaagctaaagcccttgcagaacccatgtcg
gaaatagttttagcacttcagtcatctctaaccacatccaaatgcaaaggattaatatct
ggatgcagggttttgattgaagcagacacagaacaatctgagcttctgaaccgtgcatgt
tttggtcgattaattgtaaccagccagaaggatagacaatggtatgagcttactttacat
gaagctttctacttgtgctataccttgaattgtttgaagatcattggagatgacggtgtt
gtgaaaagtaacaaagagttgtggcacttcatgatttcagaagttgatatgtttcccaag
ttttttcaggcgtactctcatctaagaaagagtaattgggtagtgaggtcaggatcccag
tatggtgttgattatgttgtgtatcgccaccatccagccttggtccattcagaatatgca
gttattgtcctttcagaaagagatggtatttcgaatgaacggttgaagttatggtctgat
ttgtatggcacaattcggctttgtggtggcgttgccaagacattgctagttttacatgtc
ctgggcattagtaacgagactgattctccaatatgcttggagaattgtaacgtagaagca
cgtaccatctctagatggattcctgagcaaactcgtgaaaagagatcagacgctaacttt
catcgtgtaattaagcctcatatttga
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