Beta vulgaris (sugar beet): 104897228
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Entry
104897228 CDS
T03548
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg00040
Pentose and glucuronate interconversions
bvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104897228
Enzymes [BR:
bvg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104897228
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104897228
NCBI-ProteinID:
XP_010682362
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Position
6:complement(48440464..48443470)
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AA seq
404 aa
AA seq
DB search
MAFHLSFIVLFTTLLAPTFINSSSPVQDPELVVHEVQEKIRNATRRNLGYLSCGTGNPID
DCWRCDHKWLKNRQRLADCGIGFGKGAIGGKNGKMYVVTNKGDDPVNPKPGTLRWGVIQD
KPLWIIFDGDMVIKLKQELMVNSFKTIDGRGANIHIAGGPCITIQYVTNVIIHGIHIHDC
KPGGNAMVRDTPTHYGWRTISDGDGISIFGGSHIWVDHCSLSSCTDGLIDAIHGSTAITI
SNNYMTHHNKVMLLGHSDSLTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
WEMYAIGGSASPTINSQGNRFLAPNDPDNKEVTKREEWPKSVWKKWNWRSQGDLMLNGAF
FTSSGAGASSSYARASSLNARPSTFVGSLTMSAGVLNCKKSSHC
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcattccatctctcctttattgtcctctttactactctccttgctcccacattcatc
aactcatcctcccctgtccaagatcctgaactagtagtacatgaagtacaagagaaaatt
cgtaatgctacaaggagaaatttaggatacctctcatgtggaacgggcaatcccatcgac
gattgctggcggtgcgaccacaagtggttgaagaaccgccaacggctagcagattgtggc
attggtttcggcaagggtgcaattggtggtaaaaatggtaaaatgtacgtggtaacgaac
aagggtgatgatcctgtgaatccgaaaccagggacattaaggtggggtgtgattcaagat
aagccattgtggatcatatttgatggtgatatggtgatcaagcttaagcaagaattgatg
gtgaactcctttaagacaattgatggtagaggagctaacatccacattgctggtggacca
tgcattactatacaatatgttacaaatgttataattcatgggatacatatacatgattgt
aagccaggagggaatgctatggtgcgggataccccaactcattatgggtggagaacaata
tcagatggtgatgggatctctatctttggtggtagtcatatttgggttgatcattgttcg
ctttctagttgtactgatgggttgattgatgctatacatgggtctactgctatcactatt
tctaacaattatatgacacatcataataaggttatgctgttgggacacagtgattctctt
actagagataagaatatgcaagttactattgcttttaaccattttggtgaaggcttagtc
cagagaatgccaaggtgtagacatggatattttcatgtggtgaataatgactatacccat
tgggaaatgtatgcaattggaggaagtgcatcacctacaataaacagccaaggcaacaga
ttccttgctcctaacgaccctgataacaaggaggtgacaaaacgcgaggaatggccaaaa
agtgtatggaagaaatggaactggagatcacaaggagatttaatgttgaatggagccttt
tttacttcttcaggcgcaggggcttcttcaagctatgcaagagcttccagtttaaatgca
aggccttctacttttgtgggatctctcaccatgtcagctggtgtcctcaattgcaagaaa
tcttctcactgctag
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