Beta vulgaris (sugar beet): 104897343
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Entry
104897343 CDS
T03548
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg00040
Pentose and glucuronate interconversions
bvg01100
Metabolic pathways
Module
bvg_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104897343
Enzymes [BR:
bvg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104897343
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Gene cluster
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
DUF7460
Motif
Other DBs
NCBI-GeneID:
104897343
NCBI-ProteinID:
XP_010682504
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Position
6:50368652..50374347
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AA seq
402 aa
AA seq
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MKTIVISSSNSLLIVFLALIFLLNQQLTAAKSENNINVVSLGAKADGKTDSSRAFSSAWD
IACKSENPSTIIVPIGRYLVNLALTFKGTNCKSKAISFVIRGTLVAPADFRVLGNGGTWF
AFDDVAGVSIFGGVFDGQGAGLWACKRSGRRCPLGATTLRFTNSRNIAINGLTSLNSQLY
HIVIDGCENVKVEGVQISASSISPNTDGIHVQSSTGVTILNSHIATGDDCVSIGAGTNNL
WIENMACGPGHGVSIGSLGKEFNEPGVVNVTLKTATFTGTENGVRIKSWGRPSNGYVRNV
LFQHLTMVNAQNPIVIDQNYCPDDKDCPGKISGVRISDVTYQDIHGSSATPIALKFDCSS
QYHCTNIELNDINLTYKTQEARSSCVNVVGTTSGSIGPQRCF
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgatagtaatatcatcctcaaattctttacttattgttttcttggccttgatt
tttctcttaaaccaacaactcacagcagctaagagtgaaaacaacattaatgtggtaagt
ctcggtgcaaaagccgacgggaagacggactcgtcaagggcattttcgtctgcatgggac
attgcatgtaagtcagaaaacccttctacaataattgtaccaataggaaggtacttggtt
aacttagccttaacatttaagggtacaaattgtaagagcaaggctataagctttgtaata
agaggcaccttggtggctcctgccgattttcgagtcctcggaaatggcggcacatggttc
gcttttgacgatgtagccggagtttctattttcggcggtgtctttgatggccaaggcgcc
ggtttgtgggcttgtaagaggtctggaagaaggtgtcccctgggagctaccacacttcgg
ttcacaaattcgaggaacattgcaatcaatggattaacatcattaaacagccaattgtac
catattgtaattgatggttgtgagaatgttaaagtggagggtgttcagatatcggcttct
agtataagtccaaatacggatggcatccatgttcaatcatcaacgggagtgacaatcttg
aactctcatattgcaacaggagatgattgtgtttcaattggcgctggaactaataactta
tggattgagaatatggcttgtggacctggacatggtgttagcattggaagcttaggaaaa
gagttcaatgagcctggagtagtgaatgtgacactcaagaccgctacttttaccggcact
gagaacggagtacgaatcaagtcttggggaagaccaagcaatggatatgttagaaatgtt
ctcttccagcatcttacaatggtgaatgctcaaaatcccattgtaatcgaccaaaactac
tgtcctgacgacaaggattgccctggaaagatttcaggagtaagaataagtgatgtaacc
taccaagacattcacggatcatcagctacgccaattgctttaaaatttgattgcagctca
caataccattgcacaaatattgagctcaacgacataaatctcacctacaaaactcaagaa
gctcgatcatcatgtgttaatgtagttggaacgacctctggttcaattgggcctcaaaga
tgtttttag
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